Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LINC00959A0A1B0GUT2 AC132938.6-201ENST00000623828 1655 ntBASIC12.24□□□□□ -0.45
LINC00959A0A1B0GUT2 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
LINC00959A0A1B0GUT2 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC00959A0A1B0GUT2 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC12.24□□□□□ -0.45
LINC00959A0A1B0GUT2 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
LINC00959A0A1B0GUT2 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
LINC00959A0A1B0GUT2 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
LINC00959A0A1B0GUT2 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00959A0A1B0GUT2 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00959A0A1B0GUT2 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00959A0A1B0GUT2 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC12.23□□□□□ -0.45
LINC00959A0A1B0GUT2 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00959A0A1B0GUT2 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00959A0A1B0GUT2 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
LINC00959A0A1B0GUT2 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC12.23□□□□□ -0.45
LINC00959A0A1B0GUT2 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC12.23□□□□□ -0.45
LINC00959A0A1B0GUT2 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC12.23□□□□□ -0.45
LINC00959A0A1B0GUT2 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00959A0A1B0GUT2 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
LINC00959A0A1B0GUT2 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00959A0A1B0GUT2 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00959A0A1B0GUT2 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00959A0A1B0GUT2 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC12.23□□□□□ -0.45
LINC00959A0A1B0GUT2 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC12.23□□□□□ -0.45
LINC00959A0A1B0GUT2 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00959A0A1B0GUT2 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00959A0A1B0GUT2 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00959A0A1B0GUT2 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00959A0A1B0GUT2 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00959A0A1B0GUT2 GAD2-202ENST00000376248 680 ntTSL 5 BASIC12.23□□□□□ -0.45
LINC00959A0A1B0GUT2 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
LINC00959A0A1B0GUT2 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
LINC00959A0A1B0GUT2 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00959A0A1B0GUT2 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00959A0A1B0GUT2 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00959A0A1B0GUT2 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC12.23□□□□□ -0.45
LINC00959A0A1B0GUT2 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC12.23□□□□□ -0.45
LINC00959A0A1B0GUT2 GLDC-219ENST00000640208 420 ntTSL 2 BASIC12.23□□□□□ -0.45
LINC00959A0A1B0GUT2 AC092865.7-201ENST00000641832 219 ntBASIC12.23□□□□□ -0.45
LINC00959A0A1B0GUT2 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00959A0A1B0GUT2 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00959A0A1B0GUT2 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00959A0A1B0GUT2 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
LINC00959A0A1B0GUT2 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
LINC00959A0A1B0GUT2 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00959A0A1B0GUT2 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00959A0A1B0GUT2 AC100803.2-201ENST00000562459 1963 ntBASIC12.23□□□□□ -0.45
LINC00959A0A1B0GUT2 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00959A0A1B0GUT2 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00959A0A1B0GUT2 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC12.23□□□□□ -0.45
LINC00959A0A1B0GUT2 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC12.23□□□□□ -0.45
LINC00959A0A1B0GUT2 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC12.23□□□□□ -0.45
LINC00959A0A1B0GUT2 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00959A0A1B0GUT2 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00959A0A1B0GUT2 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00959A0A1B0GUT2 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00959A0A1B0GUT2 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00959A0A1B0GUT2 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00959A0A1B0GUT2 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00959A0A1B0GUT2 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00959A0A1B0GUT2 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
LINC00959A0A1B0GUT2 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC12.22□□□□□ -0.45
LINC00959A0A1B0GUT2 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00959A0A1B0GUT2 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC12.22□□□□□ -0.45
LINC00959A0A1B0GUT2 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00959A0A1B0GUT2 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00959A0A1B0GUT2 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00959A0A1B0GUT2 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00959A0A1B0GUT2 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00959A0A1B0GUT2 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC12.22□□□□□ -0.45
LINC00959A0A1B0GUT2 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00959A0A1B0GUT2 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00959A0A1B0GUT2 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00959A0A1B0GUT2 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00959A0A1B0GUT2 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00959A0A1B0GUT2 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
LINC00959A0A1B0GUT2 AC009947.2-201ENST00000444014 672 ntBASIC12.22□□□□□ -0.45
LINC00959A0A1B0GUT2 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC12.22□□□□□ -0.45
LINC00959A0A1B0GUT2 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC12.22□□□□□ -0.45
LINC00959A0A1B0GUT2 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC12.22□□□□□ -0.45
LINC00959A0A1B0GUT2 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC12.22□□□□□ -0.45
LINC00959A0A1B0GUT2 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00959A0A1B0GUT2 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00959A0A1B0GUT2 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
LINC00959A0A1B0GUT2 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC12.22□□□□□ -0.45
LINC00959A0A1B0GUT2 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC12.22□□□□□ -0.45
LINC00959A0A1B0GUT2 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00959A0A1B0GUT2 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC12.22□□□□□ -0.45
LINC00959A0A1B0GUT2 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00959A0A1B0GUT2 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
LINC00959A0A1B0GUT2 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00959A0A1B0GUT2 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00959A0A1B0GUT2 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC12.22□□□□□ -0.45
LINC00959A0A1B0GUT2 AC133963.1-201ENST00000504166 1679 ntBASIC12.22□□□□□ -0.45
LINC00959A0A1B0GUT2 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00959A0A1B0GUT2 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
LINC00959A0A1B0GUT2 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00959A0A1B0GUT2 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00959A0A1B0GUT2 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms