Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV5A0A0B4J249 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV5A0A0B4J249 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV5A0A0B4J249 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC13.94□□□□□ -0.18
TRAV5A0A0B4J249 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAV5A0A0B4J249 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TRAV5A0A0B4J249 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV5A0A0B4J249 SRI-203ENST00000419179 1307 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV5A0A0B4J249 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
TRAV5A0A0B4J249 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
TRAV5A0A0B4J249 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV5A0A0B4J249 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV5A0A0B4J249 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV5A0A0B4J249 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV5A0A0B4J249 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV5A0A0B4J249 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV5A0A0B4J249 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV5A0A0B4J249 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
TRAV5A0A0B4J249 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
TRAV5A0A0B4J249 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV5A0A0B4J249 CRYGFP-201ENST00000418459 633 ntBASIC13.94□□□□□ -0.18
TRAV5A0A0B4J249 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC13.94□□□□□ -0.18
TRAV5A0A0B4J249 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC13.94□□□□□ -0.18
TRAV5A0A0B4J249 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
TRAV5A0A0B4J249 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV5A0A0B4J249 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC13.94□□□□□ -0.18
TRAV5A0A0B4J249 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV5A0A0B4J249 HOXB1-202ENST00000577092 1414 ntBASIC13.94□□□□□ -0.18
TRAV5A0A0B4J249 SPIB-206ENST00000596074 847 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV5A0A0B4J249 FAM197Y4-202ENST00000622692 608 ntBASIC13.94□□□□□ -0.18
TRAV5A0A0B4J249 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV5A0A0B4J249 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV5A0A0B4J249 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV5A0A0B4J249 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV5A0A0B4J249 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV5A0A0B4J249 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV5A0A0B4J249 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV5A0A0B4J249 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TRAV5A0A0B4J249 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV5A0A0B4J249 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV5A0A0B4J249 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV5A0A0B4J249 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV5A0A0B4J249 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV5A0A0B4J249 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
TRAV5A0A0B4J249 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC13.93□□□□□ -0.18
TRAV5A0A0B4J249 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV5A0A0B4J249 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV5A0A0B4J249 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV5A0A0B4J249 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV5A0A0B4J249 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV5A0A0B4J249 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAV5A0A0B4J249 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV5A0A0B4J249 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV5A0A0B4J249 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV5A0A0B4J249 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV5A0A0B4J249 CA15P1-201ENST00000481698 905 ntBASIC13.93□□□□□ -0.18
TRAV5A0A0B4J249 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV5A0A0B4J249 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV5A0A0B4J249 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC13.93□□□□□ -0.18
TRAV5A0A0B4J249 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV5A0A0B4J249 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
TRAV5A0A0B4J249 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV5A0A0B4J249 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV5A0A0B4J249 DGCR10-201ENST00000609839 495 ntBASIC13.93□□□□□ -0.18
TRAV5A0A0B4J249 MMD2-204ENST00000612910 778 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAV5A0A0B4J249 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV5A0A0B4J249 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV5A0A0B4J249 AC133963.1-201ENST00000504166 1679 ntBASIC13.93□□□□□ -0.18
TRAV5A0A0B4J249 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV5A0A0B4J249 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV5A0A0B4J249 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV5A0A0B4J249 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV5A0A0B4J249 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV5A0A0B4J249 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV5A0A0B4J249 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV5A0A0B4J249 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV5A0A0B4J249 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV5A0A0B4J249 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TRAV5A0A0B4J249 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
TRAV5A0A0B4J249 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV5A0A0B4J249 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV5A0A0B4J249 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV5A0A0B4J249 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms