Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV5-3A0A0A0MS03 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
TRBV5-3A0A0A0MS03 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TRBV5-3A0A0A0MS03 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV5-3A0A0A0MS03 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.78■□□□□ 0.28
TRBV5-3A0A0A0MS03 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV5-3A0A0A0MS03 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV5-3A0A0A0MS03 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.78■□□□□ 0.28
TRBV5-3A0A0A0MS03 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV5-3A0A0A0MS03 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
TRBV5-3A0A0A0MS03 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV5-3A0A0A0MS03 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
TRBV5-3A0A0A0MS03 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV5-3A0A0A0MS03 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV5-3A0A0A0MS03 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.77■□□□□ 0.28
TRBV5-3A0A0A0MS03 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.77■□□□□ 0.28
TRBV5-3A0A0A0MS03 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.77■□□□□ 0.28
TRBV5-3A0A0A0MS03 ECEL1P3-201ENST00000427961 737 ntBASIC16.77■□□□□ 0.28
TRBV5-3A0A0A0MS03 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.77■□□□□ 0.28
TRBV5-3A0A0A0MS03 ECEL1P2-202ENST00000465689 757 ntBASIC16.77■□□□□ 0.28
TRBV5-3A0A0A0MS03 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.77■□□□□ 0.28
TRBV5-3A0A0A0MS03 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.77■□□□□ 0.28
TRBV5-3A0A0A0MS03 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
TRBV5-3A0A0A0MS03 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.77■□□□□ 0.27
TRBV5-3A0A0A0MS03 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRBV5-3A0A0A0MS03 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRBV5-3A0A0A0MS03 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRBV5-3A0A0A0MS03 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRBV5-3A0A0A0MS03 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRBV5-3A0A0A0MS03 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRBV5-3A0A0A0MS03 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRBV5-3A0A0A0MS03 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV5-3A0A0A0MS03 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TRBV5-3A0A0A0MS03 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TRBV5-3A0A0A0MS03 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV5-3A0A0A0MS03 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV5-3A0A0A0MS03 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV5-3A0A0A0MS03 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.76■□□□□ 0.27
TRBV5-3A0A0A0MS03 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
TRBV5-3A0A0A0MS03 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV5-3A0A0A0MS03 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
TRBV5-3A0A0A0MS03 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TRBV5-3A0A0A0MS03 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV5-3A0A0A0MS03 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV5-3A0A0A0MS03 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.76■□□□□ 0.27
TRBV5-3A0A0A0MS03 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TRBV5-3A0A0A0MS03 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV5-3A0A0A0MS03 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.76■□□□□ 0.27
TRBV5-3A0A0A0MS03 AC005104.2-201ENST00000427818 678 ntBASIC16.76■□□□□ 0.27
TRBV5-3A0A0A0MS03 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV5-3A0A0A0MS03 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.76■□□□□ 0.27
TRBV5-3A0A0A0MS03 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV5-3A0A0A0MS03 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.76■□□□□ 0.27
TRBV5-3A0A0A0MS03 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.76■□□□□ 0.27
TRBV5-3A0A0A0MS03 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.76■□□□□ 0.27
TRBV5-3A0A0A0MS03 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.76■□□□□ 0.27
TRBV5-3A0A0A0MS03 NAPSB-206ENST00000562112 1266 ntBASIC16.76■□□□□ 0.27
TRBV5-3A0A0A0MS03 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.76■□□□□ 0.27
TRBV5-3A0A0A0MS03 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV5-3A0A0A0MS03 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
TRBV5-3A0A0A0MS03 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV5-3A0A0A0MS03 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV5-3A0A0A0MS03 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV5-3A0A0A0MS03 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
TRBV5-3A0A0A0MS03 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV5-3A0A0A0MS03 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV5-3A0A0A0MS03 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV5-3A0A0A0MS03 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TRBV5-3A0A0A0MS03 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV5-3A0A0A0MS03 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
TRBV5-3A0A0A0MS03 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV5-3A0A0A0MS03 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV5-3A0A0A0MS03 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV5-3A0A0A0MS03 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV5-3A0A0A0MS03 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
TRBV5-3A0A0A0MS03 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.75■□□□□ 0.27
TRBV5-3A0A0A0MS03 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
TRBV5-3A0A0A0MS03 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV5-3A0A0A0MS03 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.75■□□□□ 0.27
TRBV5-3A0A0A0MS03 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.75■□□□□ 0.27
TRBV5-3A0A0A0MS03 AC024563.2-201ENST00000603282 481 ntBASIC16.75■□□□□ 0.27
TRBV5-3A0A0A0MS03 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TRBV5-3A0A0A0MS03 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV5-3A0A0A0MS03 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV5-3A0A0A0MS03 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.75■□□□□ 0.27
TRBV5-3A0A0A0MS03 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV5-3A0A0A0MS03 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
TRBV5-3A0A0A0MS03 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV5-3A0A0A0MS03 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV5-3A0A0A0MS03 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.75■□□□□ 0.27
TRBV5-3A0A0A0MS03 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV5-3A0A0A0MS03 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.74■□□□□ 0.27
TRBV5-3A0A0A0MS03 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV5-3A0A0A0MS03 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV5-3A0A0A0MS03 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TRBV5-3A0A0A0MS03 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.74■□□□□ 0.27
TRBV5-3A0A0A0MS03 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV5-3A0A0A0MS03 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TRBV5-3A0A0A0MS03 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV5-3A0A0A0MS03 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms