Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 BX664615.1-201ENST00000443558 458 ntBASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 USF2-205ENST00000594064 1179 ntTSL 2 BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 AC097493.4-201ENST00000641197 219 ntBASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 AC068880.1-201ENST00000507289 2297 ntBASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 AP000997.3-201ENST00000623333 2250 ntBASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV1A0A0A0MS02 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 TERF1P1-201ENST00000311003 1181 ntBASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 AC005521.1-201ENST00000393351 872 ntBASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 AC211429.1-201ENST00000415277 523 ntBASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 PVRIG2P-201ENST00000435460 978 ntBASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 KRT18P57-201ENST00000443599 1254 ntBASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 CD81-212ENST00000526072 1172 ntTSL 5 BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV1A0A0A0MS02 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
TRGV1A0A0A0MS02 AC093010.1-201ENST00000473625 1624 ntBASIC13.02□□□□□ -0.32
TRGV1A0A0A0MS02 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TRGV1A0A0A0MS02 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TRGV1A0A0A0MS02 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRGV1A0A0A0MS02 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRGV1A0A0A0MS02 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC13.02□□□□□ -0.32
TRGV1A0A0A0MS02 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC13.02□□□□□ -0.32
TRGV1A0A0A0MS02 GATB-213ENST00000515812 1893 ntTSL 5 BASIC13.02□□□□□ -0.32
TRGV1A0A0A0MS02 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRGV1A0A0A0MS02 SP100-208ENST00000427101 1922 ntTSL 2 BASIC13.02□□□□□ -0.32
TRGV1A0A0A0MS02 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRGV1A0A0A0MS02 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms