Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC29.63■■■□□ 2.33
BIVM-ERCC5R4GMW8 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
BIVM-ERCC5R4GMW8 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
BIVM-ERCC5R4GMW8 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
BIVM-ERCC5R4GMW8 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
BIVM-ERCC5R4GMW8 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
BIVM-ERCC5R4GMW8 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
BIVM-ERCC5R4GMW8 AP002414.1-201ENST00000391405 1147 ntBASIC29.63■■■□□ 2.33
BIVM-ERCC5R4GMW8 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC29.63■■■□□ 2.33
BIVM-ERCC5R4GMW8 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC29.63■■■□□ 2.33
BIVM-ERCC5R4GMW8 RPL28-205ENST00000558131 444 ntTSL 5 BASIC29.63■■■□□ 2.33
BIVM-ERCC5R4GMW8 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
BIVM-ERCC5R4GMW8 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC29.63■■■□□ 2.33
BIVM-ERCC5R4GMW8 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC29.63■■■□□ 2.33
BIVM-ERCC5R4GMW8 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
BIVM-ERCC5R4GMW8 PC-214ENST00000628663 1470 ntTSL 5 BASIC29.62■■■□□ 2.33
BIVM-ERCC5R4GMW8 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
BIVM-ERCC5R4GMW8 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
BIVM-ERCC5R4GMW8 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC29.62■■■□□ 2.33
BIVM-ERCC5R4GMW8 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
BIVM-ERCC5R4GMW8 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
BIVM-ERCC5R4GMW8 POR-209ENST00000439269 1858 ntTSL 2 BASIC29.62■■■□□ 2.33
BIVM-ERCC5R4GMW8 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
BIVM-ERCC5R4GMW8 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC29.62■■■□□ 2.33
BIVM-ERCC5R4GMW8 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC29.62■■■□□ 2.33
BIVM-ERCC5R4GMW8 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC29.62■■■□□ 2.33
BIVM-ERCC5R4GMW8 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC29.62■■■□□ 2.33
BIVM-ERCC5R4GMW8 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC29.62■■■□□ 2.33
BIVM-ERCC5R4GMW8 METTL26-205ENST00000397666 726 ntTSL 2 BASIC29.62■■■□□ 2.33
BIVM-ERCC5R4GMW8 ACTG1P4-201ENST00000425123 1122 ntBASIC29.62■■■□□ 2.33
BIVM-ERCC5R4GMW8 RHOQP3-201ENST00000437982 621 ntBASIC29.62■■■□□ 2.33
BIVM-ERCC5R4GMW8 VN2R19P-201ENST00000442399 1052 ntBASIC29.62■■■□□ 2.33
BIVM-ERCC5R4GMW8 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC29.62■■■□□ 2.33
BIVM-ERCC5R4GMW8 AP000344.2-201ENST00000512987 629 ntBASIC29.62■■■□□ 2.33
BIVM-ERCC5R4GMW8 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
BIVM-ERCC5R4GMW8 AL596442.2-201ENST00000610240 980 ntBASIC29.62■■■□□ 2.33
BIVM-ERCC5R4GMW8 AC004790.2-201ENST00000623588 572 ntBASIC29.62■■■□□ 2.33
BIVM-ERCC5R4GMW8 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC29.62■■■□□ 2.33
BIVM-ERCC5R4GMW8 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
BIVM-ERCC5R4GMW8 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC29.62■■■□□ 2.33
BIVM-ERCC5R4GMW8 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
BIVM-ERCC5R4GMW8 AC093677.2-201ENST00000600169 1863 ntBASIC29.62■■■□□ 2.33
BIVM-ERCC5R4GMW8 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
BIVM-ERCC5R4GMW8 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
BIVM-ERCC5R4GMW8 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
BIVM-ERCC5R4GMW8 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
BIVM-ERCC5R4GMW8 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
BIVM-ERCC5R4GMW8 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
BIVM-ERCC5R4GMW8 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
BIVM-ERCC5R4GMW8 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC29.61■■■□□ 2.33
BIVM-ERCC5R4GMW8 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC29.61■■■□□ 2.33
BIVM-ERCC5R4GMW8 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC29.61■■■□□ 2.33
BIVM-ERCC5R4GMW8 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC29.61■■■□□ 2.33
BIVM-ERCC5R4GMW8 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
BIVM-ERCC5R4GMW8 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC29.61■■■□□ 2.33
BIVM-ERCC5R4GMW8 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC29.61■■■□□ 2.33
BIVM-ERCC5R4GMW8 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
BIVM-ERCC5R4GMW8 STK19B-204ENST00000512515 211 ntBASIC29.6■■■□□ 2.33
BIVM-ERCC5R4GMW8 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC29.6■■■□□ 2.33
BIVM-ERCC5R4GMW8 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
BIVM-ERCC5R4GMW8 CD63-210ENST00000550776 870 ntTSL 5 BASIC29.6■■■□□ 2.33
BIVM-ERCC5R4GMW8 KRT19P2-202ENST00000557173 1012 ntBASIC29.6■■■□□ 2.33
BIVM-ERCC5R4GMW8 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC29.6■■■□□ 2.33
BIVM-ERCC5R4GMW8 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC29.6■■■□□ 2.33
BIVM-ERCC5R4GMW8 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC29.6■■■□□ 2.33
BIVM-ERCC5R4GMW8 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
BIVM-ERCC5R4GMW8 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC29.6■■■□□ 2.33
BIVM-ERCC5R4GMW8 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
BIVM-ERCC5R4GMW8 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC29.6■■■□□ 2.33
BIVM-ERCC5R4GMW8 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC29.6■■■□□ 2.33
BIVM-ERCC5R4GMW8 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC29.6■■■□□ 2.33
BIVM-ERCC5R4GMW8 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
BIVM-ERCC5R4GMW8 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC29.6■■■□□ 2.33
BIVM-ERCC5R4GMW8 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
BIVM-ERCC5R4GMW8 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
BIVM-ERCC5R4GMW8 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
BIVM-ERCC5R4GMW8 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC29.6■■■□□ 2.33
BIVM-ERCC5R4GMW8 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
BIVM-ERCC5R4GMW8 AC009949.1-201ENST00000623048 1830 ntBASIC29.59■■■□□ 2.33
BIVM-ERCC5R4GMW8 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC29.59■■■□□ 2.33
BIVM-ERCC5R4GMW8 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
BIVM-ERCC5R4GMW8 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
BIVM-ERCC5R4GMW8 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
BIVM-ERCC5R4GMW8 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
BIVM-ERCC5R4GMW8 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC29.59■■■□□ 2.33
BIVM-ERCC5R4GMW8 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC29.59■■■□□ 2.33
BIVM-ERCC5R4GMW8 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
BIVM-ERCC5R4GMW8 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
BIVM-ERCC5R4GMW8 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC29.59■■■□□ 2.33
BIVM-ERCC5R4GMW8 SIGLEC30P-201ENST00000455569 941 ntBASIC29.59■■■□□ 2.33
BIVM-ERCC5R4GMW8 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC29.59■■■□□ 2.33
BIVM-ERCC5R4GMW8 RPS15-207ENST00000591032 550 ntTSL 3 BASIC29.59■■■□□ 2.33
BIVM-ERCC5R4GMW8 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
BIVM-ERCC5R4GMW8 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC29.59■■■□□ 2.33
BIVM-ERCC5R4GMW8 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC29.59■■■□□ 2.33
BIVM-ERCC5R4GMW8 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
BIVM-ERCC5R4GMW8 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC29.59■■■□□ 2.33
BIVM-ERCC5R4GMW8 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
BIVM-ERCC5R4GMW8 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC29.58■■■□□ 2.33
BIVM-ERCC5R4GMW8 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC29.58■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms