Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGC4Q9Y5F7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PCDHGC4Q9Y5F7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGC4Q9Y5F7 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PCDHGC4Q9Y5F7 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGC4Q9Y5F7 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
PCDHGC4Q9Y5F7 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDHGC4Q9Y5F7 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGC4Q9Y5F7 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.11■□□□□ 0.49
PCDHGC4Q9Y5F7 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGC4Q9Y5F7 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.11■□□□□ 0.49
PCDHGC4Q9Y5F7 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
PCDHGC4Q9Y5F7 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.11■□□□□ 0.49
PCDHGC4Q9Y5F7 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHGC4Q9Y5F7 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.11■□□□□ 0.49
PCDHGC4Q9Y5F7 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDHGC4Q9Y5F7 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGC4Q9Y5F7 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PCDHGC4Q9Y5F7 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHGC4Q9Y5F7 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGC4Q9Y5F7 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGC4Q9Y5F7 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHGC4Q9Y5F7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHGC4Q9Y5F7 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHGC4Q9Y5F7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PCDHGC4Q9Y5F7 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PCDHGC4Q9Y5F7 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGC4Q9Y5F7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGC4Q9Y5F7 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGC4Q9Y5F7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGC4Q9Y5F7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
PCDHGC4Q9Y5F7 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.1■□□□□ 0.49
PCDHGC4Q9Y5F7 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PCDHGC4Q9Y5F7 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDHGC4Q9Y5F7 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGC4Q9Y5F7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGC4Q9Y5F7 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGC4Q9Y5F7 AC233702.3-201ENST00000578656 1387 ntBASIC18.1■□□□□ 0.49
PCDHGC4Q9Y5F7 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGC4Q9Y5F7 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGC4Q9Y5F7 AP000867.3-201ENST00000524675 377 ntBASIC18.1■□□□□ 0.49
PCDHGC4Q9Y5F7 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGC4Q9Y5F7 AP005901.3-202ENST00000581653 237 ntBASIC18.1■□□□□ 0.49
PCDHGC4Q9Y5F7 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.1■□□□□ 0.49
PCDHGC4Q9Y5F7 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.1■□□□□ 0.49
PCDHGC4Q9Y5F7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGC4Q9Y5F7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGC4Q9Y5F7 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PCDHGC4Q9Y5F7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGC4Q9Y5F7 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGC4Q9Y5F7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGC4Q9Y5F7 NOC2LP1-202ENST00000452600 2235 ntBASIC18.1■□□□□ 0.49
PCDHGC4Q9Y5F7 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGC4Q9Y5F7 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGC4Q9Y5F7 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGC4Q9Y5F7 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGC4Q9Y5F7 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGC4Q9Y5F7 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGC4Q9Y5F7 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.09■□□□□ 0.49
PCDHGC4Q9Y5F7 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGC4Q9Y5F7 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGC4Q9Y5F7 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGC4Q9Y5F7 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHGC4Q9Y5F7 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGC4Q9Y5F7 KRT8P47-201ENST00000604727 1398 ntBASIC18.09■□□□□ 0.49
PCDHGC4Q9Y5F7 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
PCDHGC4Q9Y5F7 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGC4Q9Y5F7 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHGC4Q9Y5F7 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.09■□□□□ 0.49
PCDHGC4Q9Y5F7 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGC4Q9Y5F7 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.09■□□□□ 0.49
PCDHGC4Q9Y5F7 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHGC4Q9Y5F7 AL353801.3-201ENST00000609898 542 ntBASIC18.09■□□□□ 0.49
PCDHGC4Q9Y5F7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGC4Q9Y5F7 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHGC4Q9Y5F7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGC4Q9Y5F7 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGC4Q9Y5F7 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHGC4Q9Y5F7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGC4Q9Y5F7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGC4Q9Y5F7 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGC4Q9Y5F7 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHGC4Q9Y5F7 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGC4Q9Y5F7 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGC4Q9Y5F7 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGC4Q9Y5F7 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHGC4Q9Y5F7 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.08■□□□□ 0.49
PCDHGC4Q9Y5F7 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.08■□□□□ 0.49
PCDHGC4Q9Y5F7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.08■□□□□ 0.49
PCDHGC4Q9Y5F7 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGC4Q9Y5F7 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.08■□□□□ 0.48
PCDHGC4Q9Y5F7 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGC4Q9Y5F7 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.08■□□□□ 0.48
PCDHGC4Q9Y5F7 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.08■□□□□ 0.48
PCDHGC4Q9Y5F7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.08■□□□□ 0.48
PCDHGC4Q9Y5F7 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.08■□□□□ 0.48
PCDHGC4Q9Y5F7 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.08■□□□□ 0.48
PCDHGC4Q9Y5F7 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGC4Q9Y5F7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGC4Q9Y5F7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms