Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 PMS2P2-201ENST00000425039 1128 ntBASIC24.42■■□□□ 1.5
NINLQ9Y2I6 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
NINLQ9Y2I6 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC24.42■■□□□ 1.5
NINLQ9Y2I6 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC24.42■■□□□ 1.5
NINLQ9Y2I6 AC116407.2-201ENST00000613639 860 ntBASIC24.42■■□□□ 1.5
NINLQ9Y2I6 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
NINLQ9Y2I6 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
NINLQ9Y2I6 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC24.42■■□□□ 1.5
NINLQ9Y2I6 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC24.42■■□□□ 1.5
NINLQ9Y2I6 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
NINLQ9Y2I6 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC24.42■■□□□ 1.5
NINLQ9Y2I6 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
NINLQ9Y2I6 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC24.42■■□□□ 1.5
NINLQ9Y2I6 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
NINLQ9Y2I6 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
NINLQ9Y2I6 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
NINLQ9Y2I6 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
NINLQ9Y2I6 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
NINLQ9Y2I6 ADM-208ENST00000534464 1640 ntTSL 2 BASIC24.42■■□□□ 1.5
NINLQ9Y2I6 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC24.42■■□□□ 1.5
NINLQ9Y2I6 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
NINLQ9Y2I6 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
NINLQ9Y2I6 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
NINLQ9Y2I6 AC093909.1-201ENST00000504731 1122 ntBASIC24.42■■□□□ 1.5
NINLQ9Y2I6 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC24.42■■□□□ 1.5
NINLQ9Y2I6 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
NINLQ9Y2I6 AC139887.3-201ENST00000568585 713 ntBASIC24.42■■□□□ 1.5
NINLQ9Y2I6 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
NINLQ9Y2I6 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
NINLQ9Y2I6 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
NINLQ9Y2I6 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
NINLQ9Y2I6 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
NINLQ9Y2I6 AC090164.3-201ENST00000610780 2143 ntBASIC24.41■■□□□ 1.5
NINLQ9Y2I6 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC24.41■■□□□ 1.5
NINLQ9Y2I6 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC24.41■■□□□ 1.5
NINLQ9Y2I6 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC24.41■■□□□ 1.5
NINLQ9Y2I6 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC24.41■■□□□ 1.5
NINLQ9Y2I6 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
NINLQ9Y2I6 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC24.41■■□□□ 1.5
NINLQ9Y2I6 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
NINLQ9Y2I6 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
NINLQ9Y2I6 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
NINLQ9Y2I6 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
NINLQ9Y2I6 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
NINLQ9Y2I6 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
NINLQ9Y2I6 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC24.41■■□□□ 1.5
NINLQ9Y2I6 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC24.41■■□□□ 1.5
NINLQ9Y2I6 LITAF-211ENST00000572255 516 ntTSL 4 BASIC24.41■■□□□ 1.5
NINLQ9Y2I6 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC24.41■■□□□ 1.5
NINLQ9Y2I6 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC24.41■■□□□ 1.5
NINLQ9Y2I6 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
NINLQ9Y2I6 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
NINLQ9Y2I6 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
NINLQ9Y2I6 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
NINLQ9Y2I6 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
NINLQ9Y2I6 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
NINLQ9Y2I6 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
NINLQ9Y2I6 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
NINLQ9Y2I6 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
NINLQ9Y2I6 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
NINLQ9Y2I6 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC24.4■■□□□ 1.5
NINLQ9Y2I6 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
NINLQ9Y2I6 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
NINLQ9Y2I6 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
NINLQ9Y2I6 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
NINLQ9Y2I6 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC24.4■■□□□ 1.5
NINLQ9Y2I6 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
NINLQ9Y2I6 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC24.4■■□□□ 1.5
NINLQ9Y2I6 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC24.4■■□□□ 1.5
NINLQ9Y2I6 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
NINLQ9Y2I6 COX10-202ENST00000429152 875 ntTSL 2 BASIC24.4■■□□□ 1.5
NINLQ9Y2I6 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC24.4■■□□□ 1.5
NINLQ9Y2I6 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC24.4■■□□□ 1.5
NINLQ9Y2I6 SLC25A1P1-201ENST00000528351 927 ntBASIC24.4■■□□□ 1.5
NINLQ9Y2I6 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC24.4■■□□□ 1.5
NINLQ9Y2I6 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC24.4■■□□□ 1.5
NINLQ9Y2I6 AL049840.3-201ENST00000602669 611 ntBASIC24.4■■□□□ 1.5
NINLQ9Y2I6 AC019129.2-201ENST00000609837 1235 ntBASIC24.4■■□□□ 1.5
NINLQ9Y2I6 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC24.4■■□□□ 1.5
NINLQ9Y2I6 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
NINLQ9Y2I6 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
NINLQ9Y2I6 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC24.39■■□□□ 1.5
NINLQ9Y2I6 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
NINLQ9Y2I6 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
NINLQ9Y2I6 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
NINLQ9Y2I6 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
NINLQ9Y2I6 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC24.39■■□□□ 1.5
NINLQ9Y2I6 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.5
NINLQ9Y2I6 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC24.39■■□□□ 1.5
NINLQ9Y2I6 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
NINLQ9Y2I6 AC100803.2-201ENST00000562459 1963 ntBASIC24.39■■□□□ 1.49
NINLQ9Y2I6 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
NINLQ9Y2I6 RPS2P28-201ENST00000314255 741 ntBASIC24.39■■□□□ 1.49
NINLQ9Y2I6 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
NINLQ9Y2I6 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC24.39■■□□□ 1.49
NINLQ9Y2I6 LAGE3P1-201ENST00000425356 484 ntBASIC24.39■■□□□ 1.49
NINLQ9Y2I6 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC24.39■■□□□ 1.49
NINLQ9Y2I6 NKAPP1-205ENST00000585790 367 ntBASIC24.39■■□□□ 1.49
NINLQ9Y2I6 ABBA01031661.1-201ENST00000634362 1253 ntBASIC24.39■■□□□ 1.49
NINLQ9Y2I6 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms