Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 LINC00265-3P-201ENST00000447588 903 ntBASIC19.31■□□□□ 0.68
GTF3C4Q9UKN8 RN7SL606P-201ENST00000472779 293 ntBASIC19.31■□□□□ 0.68
GTF3C4Q9UKN8 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.31■□□□□ 0.68
GTF3C4Q9UKN8 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
GTF3C4Q9UKN8 AC113404.2-201ENST00000507884 177 ntBASIC19.31■□□□□ 0.68
GTF3C4Q9UKN8 GUSBP12-201ENST00000513727 720 ntBASIC19.31■□□□□ 0.68
GTF3C4Q9UKN8 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
GTF3C4Q9UKN8 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
GTF3C4Q9UKN8 MIR3652-201ENST00000579335 131 ntBASIC19.31■□□□□ 0.68
GTF3C4Q9UKN8 AC008687.5-201ENST00000593746 558 ntBASIC19.31■□□□□ 0.68
GTF3C4Q9UKN8 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.31■□□□□ 0.68
GTF3C4Q9UKN8 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
GTF3C4Q9UKN8 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.31■□□□□ 0.68
GTF3C4Q9UKN8 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.31■□□□□ 0.68
GTF3C4Q9UKN8 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GTF3C4Q9UKN8 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
GTF3C4Q9UKN8 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
GTF3C4Q9UKN8 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GTF3C4Q9UKN8 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GTF3C4Q9UKN8 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
GTF3C4Q9UKN8 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.31■□□□□ 0.68
GTF3C4Q9UKN8 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
GTF3C4Q9UKN8 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GTF3C4Q9UKN8 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
GTF3C4Q9UKN8 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GTF3C4Q9UKN8 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.3■□□□□ 0.68
GTF3C4Q9UKN8 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GTF3C4Q9UKN8 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GTF3C4Q9UKN8 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.3■□□□□ 0.68
GTF3C4Q9UKN8 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GTF3C4Q9UKN8 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.3■□□□□ 0.68
GTF3C4Q9UKN8 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.3■□□□□ 0.68
GTF3C4Q9UKN8 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GTF3C4Q9UKN8 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GTF3C4Q9UKN8 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GTF3C4Q9UKN8 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.3■□□□□ 0.68
GTF3C4Q9UKN8 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
GTF3C4Q9UKN8 TOB2P1-201ENST00000469761 992 ntBASIC19.3■□□□□ 0.68
GTF3C4Q9UKN8 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.3■□□□□ 0.68
GTF3C4Q9UKN8 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GTF3C4Q9UKN8 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.3■□□□□ 0.68
GTF3C4Q9UKN8 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.3■□□□□ 0.68
GTF3C4Q9UKN8 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.3■□□□□ 0.68
GTF3C4Q9UKN8 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.3■□□□□ 0.68
GTF3C4Q9UKN8 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.3■□□□□ 0.68
GTF3C4Q9UKN8 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.3■□□□□ 0.68
GTF3C4Q9UKN8 AL592071.1-201ENST00000611956 408 ntBASIC19.3■□□□□ 0.68
GTF3C4Q9UKN8 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.3■□□□□ 0.68
GTF3C4Q9UKN8 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GTF3C4Q9UKN8 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GTF3C4Q9UKN8 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GTF3C4Q9UKN8 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GTF3C4Q9UKN8 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
GTF3C4Q9UKN8 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GTF3C4Q9UKN8 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
GTF3C4Q9UKN8 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GTF3C4Q9UKN8 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.3■□□□□ 0.68
GTF3C4Q9UKN8 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GTF3C4Q9UKN8 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GTF3C4Q9UKN8 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GTF3C4Q9UKN8 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.29■□□□□ 0.68
GTF3C4Q9UKN8 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GTF3C4Q9UKN8 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.29■□□□□ 0.68
GTF3C4Q9UKN8 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GTF3C4Q9UKN8 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
GTF3C4Q9UKN8 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GTF3C4Q9UKN8 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GTF3C4Q9UKN8 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GTF3C4Q9UKN8 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GTF3C4Q9UKN8 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.29■□□□□ 0.68
GTF3C4Q9UKN8 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.29■□□□□ 0.68
GTF3C4Q9UKN8 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GTF3C4Q9UKN8 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GTF3C4Q9UKN8 AP000867.3-201ENST00000524675 377 ntBASIC19.29■□□□□ 0.68
GTF3C4Q9UKN8 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.29■□□□□ 0.68
GTF3C4Q9UKN8 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.29■□□□□ 0.68
GTF3C4Q9UKN8 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.29■□□□□ 0.68
GTF3C4Q9UKN8 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.29■□□□□ 0.68
GTF3C4Q9UKN8 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GTF3C4Q9UKN8 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GTF3C4Q9UKN8 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
GTF3C4Q9UKN8 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
GTF3C4Q9UKN8 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GTF3C4Q9UKN8 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
GTF3C4Q9UKN8 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GTF3C4Q9UKN8 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
GTF3C4Q9UKN8 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GTF3C4Q9UKN8 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.28■□□□□ 0.68
GTF3C4Q9UKN8 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
GTF3C4Q9UKN8 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GTF3C4Q9UKN8 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GTF3C4Q9UKN8 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
GTF3C4Q9UKN8 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GTF3C4Q9UKN8 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
GTF3C4Q9UKN8 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.28■□□□□ 0.68
GTF3C4Q9UKN8 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
GTF3C4Q9UKN8 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
GTF3C4Q9UKN8 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
GTF3C4Q9UKN8 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GTF3C4Q9UKN8 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms