Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC010653.2-201ENST00000623505 997 ntBASIC16.97■□□□□ 0.31
VAPAQ9P0L0 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VAPAQ9P0L0 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
VAPAQ9P0L0 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.97■□□□□ 0.31
VAPAQ9P0L0 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VAPAQ9P0L0 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VAPAQ9P0L0 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
VAPAQ9P0L0 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
VAPAQ9P0L0 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.97■□□□□ 0.31
VAPAQ9P0L0 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
VAPAQ9P0L0 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
VAPAQ9P0L0 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VAPAQ9P0L0 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VAPAQ9P0L0 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
VAPAQ9P0L0 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.97■□□□□ 0.31
VAPAQ9P0L0 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VAPAQ9P0L0 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VAPAQ9P0L0 AC124067.4-201ENST00000519691 2379 ntBASIC16.96■□□□□ 0.31
VAPAQ9P0L0 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
VAPAQ9P0L0 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.96■□□□□ 0.31
VAPAQ9P0L0 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.96■□□□□ 0.31
VAPAQ9P0L0 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VAPAQ9P0L0 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VAPAQ9P0L0 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
VAPAQ9P0L0 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VAPAQ9P0L0 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VAPAQ9P0L0 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VAPAQ9P0L0 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VAPAQ9P0L0 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VAPAQ9P0L0 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VAPAQ9P0L0 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VAPAQ9P0L0 TSPY7P-201ENST00000431358 1114 ntBASIC16.96■□□□□ 0.31
VAPAQ9P0L0 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.96■□□□□ 0.31
VAPAQ9P0L0 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.96■□□□□ 0.31
VAPAQ9P0L0 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VAPAQ9P0L0 AC024243.1-201ENST00000609234 778 ntBASIC16.96■□□□□ 0.31
VAPAQ9P0L0 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
VAPAQ9P0L0 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VAPAQ9P0L0 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
VAPAQ9P0L0 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.96■□□□□ 0.31
VAPAQ9P0L0 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
VAPAQ9P0L0 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
VAPAQ9P0L0 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VAPAQ9P0L0 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
VAPAQ9P0L0 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
VAPAQ9P0L0 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
VAPAQ9P0L0 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
VAPAQ9P0L0 HLA-J-201ENST00000462773 1622 ntBASIC16.96■□□□□ 0.3
VAPAQ9P0L0 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VAPAQ9P0L0 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.95■□□□□ 0.3
VAPAQ9P0L0 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
VAPAQ9P0L0 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
VAPAQ9P0L0 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VAPAQ9P0L0 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VAPAQ9P0L0 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VAPAQ9P0L0 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VAPAQ9P0L0 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
VAPAQ9P0L0 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
VAPAQ9P0L0 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VAPAQ9P0L0 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
VAPAQ9P0L0 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.95■□□□□ 0.3
VAPAQ9P0L0 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.95■□□□□ 0.3
VAPAQ9P0L0 INGX-201ENST00000359239 846 ntBASIC16.95■□□□□ 0.3
VAPAQ9P0L0 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VAPAQ9P0L0 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VAPAQ9P0L0 MIR1238-201ENST00000408483 83 ntBASIC16.95■□□□□ 0.3
VAPAQ9P0L0 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VAPAQ9P0L0 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
VAPAQ9P0L0 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VAPAQ9P0L0 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VAPAQ9P0L0 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.95■□□□□ 0.3
VAPAQ9P0L0 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
VAPAQ9P0L0 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.95■□□□□ 0.3
VAPAQ9P0L0 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VAPAQ9P0L0 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VAPAQ9P0L0 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VAPAQ9P0L0 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.95■□□□□ 0.3
VAPAQ9P0L0 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
VAPAQ9P0L0 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VAPAQ9P0L0 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VAPAQ9P0L0 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VAPAQ9P0L0 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.95■□□□□ 0.3
VAPAQ9P0L0 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VAPAQ9P0L0 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.95■□□□□ 0.3
VAPAQ9P0L0 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VAPAQ9P0L0 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
VAPAQ9P0L0 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.95■□□□□ 0.3
VAPAQ9P0L0 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VAPAQ9P0L0 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VAPAQ9P0L0 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.94■□□□□ 0.3
VAPAQ9P0L0 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
VAPAQ9P0L0 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
VAPAQ9P0L0 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VAPAQ9P0L0 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VAPAQ9P0L0 REXO1L11P-201ENST00000620964 1927 ntBASIC16.94■□□□□ 0.3
VAPAQ9P0L0 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.94■□□□□ 0.3
VAPAQ9P0L0 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.94■□□□□ 0.3
VAPAQ9P0L0 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
VAPAQ9P0L0 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.94■□□□□ 0.3
VAPAQ9P0L0 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms