Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
LIN7CQ9NUP9 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
LIN7CQ9NUP9 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LIN7CQ9NUP9 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LIN7CQ9NUP9 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
LIN7CQ9NUP9 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC14.94□□□□□ -0.02
LIN7CQ9NUP9 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC14.94□□□□□ -0.02
LIN7CQ9NUP9 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC14.94□□□□□ -0.02
LIN7CQ9NUP9 CYP51A1P1-201ENST00000492267 1507 ntBASIC14.94□□□□□ -0.02
LIN7CQ9NUP9 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LIN7CQ9NUP9 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC14.94□□□□□ -0.02
LIN7CQ9NUP9 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
LIN7CQ9NUP9 ECEL1P3-201ENST00000427961 737 ntBASIC14.94□□□□□ -0.02
LIN7CQ9NUP9 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC14.94□□□□□ -0.02
LIN7CQ9NUP9 DUT-205ENST00000558813 769 ntTSL 2 BASIC14.94□□□□□ -0.02
LIN7CQ9NUP9 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC14.94□□□□□ -0.02
LIN7CQ9NUP9 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC14.94□□□□□ -0.02
LIN7CQ9NUP9 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC14.94□□□□□ -0.02
LIN7CQ9NUP9 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
LIN7CQ9NUP9 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
LIN7CQ9NUP9 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LIN7CQ9NUP9 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
LIN7CQ9NUP9 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
LIN7CQ9NUP9 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
LIN7CQ9NUP9 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LIN7CQ9NUP9 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LIN7CQ9NUP9 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LIN7CQ9NUP9 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LIN7CQ9NUP9 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
LIN7CQ9NUP9 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LIN7CQ9NUP9 SDHAP2-201ENST00000455183 2001 ntBASIC14.93□□□□□ -0.02
LIN7CQ9NUP9 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LIN7CQ9NUP9 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LIN7CQ9NUP9 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
LIN7CQ9NUP9 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC14.93□□□□□ -0.02
LIN7CQ9NUP9 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
LIN7CQ9NUP9 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LIN7CQ9NUP9 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LIN7CQ9NUP9 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14.93□□□□□ -0.02
LIN7CQ9NUP9 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC14.93□□□□□ -0.02
LIN7CQ9NUP9 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
LIN7CQ9NUP9 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LIN7CQ9NUP9 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LIN7CQ9NUP9 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC14.93□□□□□ -0.02
LIN7CQ9NUP9 INGX-201ENST00000359239 846 ntBASIC14.93□□□□□ -0.02
LIN7CQ9NUP9 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LIN7CQ9NUP9 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
LIN7CQ9NUP9 AC113347.1-201ENST00000413321 391 ntBASIC14.93□□□□□ -0.02
LIN7CQ9NUP9 LIN28AP1-201ENST00000429574 405 ntBASIC14.93□□□□□ -0.02
LIN7CQ9NUP9 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LIN7CQ9NUP9 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC14.93□□□□□ -0.02
LIN7CQ9NUP9 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC14.93□□□□□ -0.02
LIN7CQ9NUP9 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LIN7CQ9NUP9 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC14.93□□□□□ -0.02
LIN7CQ9NUP9 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LIN7CQ9NUP9 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LIN7CQ9NUP9 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LIN7CQ9NUP9 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LIN7CQ9NUP9 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LIN7CQ9NUP9 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC14.93□□□□□ -0.02
LIN7CQ9NUP9 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LIN7CQ9NUP9 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LIN7CQ9NUP9 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LIN7CQ9NUP9 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
LIN7CQ9NUP9 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LIN7CQ9NUP9 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LIN7CQ9NUP9 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LIN7CQ9NUP9 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
LIN7CQ9NUP9 KRT8P7-201ENST00000533003 1432 ntBASIC14.92□□□□□ -0.02
LIN7CQ9NUP9 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LIN7CQ9NUP9 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC14.92□□□□□ -0.02
LIN7CQ9NUP9 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
LIN7CQ9NUP9 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LIN7CQ9NUP9 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LIN7CQ9NUP9 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
LIN7CQ9NUP9 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
LIN7CQ9NUP9 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LIN7CQ9NUP9 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
LIN7CQ9NUP9 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LIN7CQ9NUP9 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LIN7CQ9NUP9 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC14.92□□□□□ -0.02
LIN7CQ9NUP9 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC14.92□□□□□ -0.02
LIN7CQ9NUP9 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
LIN7CQ9NUP9 UROS-202ENST00000368778 1556 ntTSL 2 BASIC14.92□□□□□ -0.02
LIN7CQ9NUP9 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LIN7CQ9NUP9 AC036111.1-201ENST00000533973 1582 ntBASIC14.92□□□□□ -0.02
LIN7CQ9NUP9 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LIN7CQ9NUP9 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
LIN7CQ9NUP9 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LIN7CQ9NUP9 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LIN7CQ9NUP9 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LIN7CQ9NUP9 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LIN7CQ9NUP9 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LIN7CQ9NUP9 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LIN7CQ9NUP9 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
LIN7CQ9NUP9 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
LIN7CQ9NUP9 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC14.92□□□□□ -0.02
LIN7CQ9NUP9 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
LIN7CQ9NUP9 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC14.92□□□□□ -0.02
LIN7CQ9NUP9 HOXB1-202ENST00000577092 1414 ntBASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms