Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CISHQ9NSE2 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CISHQ9NSE2 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CISHQ9NSE2 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CISHQ9NSE2 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CISHQ9NSE2 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CISHQ9NSE2 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CISHQ9NSE2 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.12■□□□□ 0.65
CISHQ9NSE2 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.12■□□□□ 0.65
CISHQ9NSE2 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CISHQ9NSE2 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CISHQ9NSE2 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CISHQ9NSE2 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CISHQ9NSE2 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CISHQ9NSE2 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CISHQ9NSE2 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CISHQ9NSE2 UPK3BP1-201ENST00000428678 509 ntBASIC19.12■□□□□ 0.65
CISHQ9NSE2 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.12■□□□□ 0.65
CISHQ9NSE2 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.12■□□□□ 0.65
CISHQ9NSE2 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.12■□□□□ 0.65
CISHQ9NSE2 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.12■□□□□ 0.65
CISHQ9NSE2 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CISHQ9NSE2 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.12■□□□□ 0.65
CISHQ9NSE2 AP002414.4-201ENST00000589764 1148 ntBASIC19.12■□□□□ 0.65
CISHQ9NSE2 NPAP1P7-201ENST00000613027 823 ntBASIC19.12■□□□□ 0.65
CISHQ9NSE2 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CISHQ9NSE2 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CISHQ9NSE2 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CISHQ9NSE2 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CISHQ9NSE2 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CISHQ9NSE2 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CISHQ9NSE2 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CISHQ9NSE2 AC012317.2-201ENST00000623305 2251 ntBASIC19.12■□□□□ 0.65
CISHQ9NSE2 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CISHQ9NSE2 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.12■□□□□ 0.65
CISHQ9NSE2 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CISHQ9NSE2 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CISHQ9NSE2 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CISHQ9NSE2 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.11■□□□□ 0.65
CISHQ9NSE2 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CISHQ9NSE2 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CISHQ9NSE2 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CISHQ9NSE2 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CISHQ9NSE2 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CISHQ9NSE2 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
CISHQ9NSE2 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CISHQ9NSE2 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CISHQ9NSE2 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CISHQ9NSE2 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CISHQ9NSE2 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CISHQ9NSE2 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.11■□□□□ 0.65
CISHQ9NSE2 AC011840.4-201ENST00000578471 627 ntBASIC19.11■□□□□ 0.65
CISHQ9NSE2 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CISHQ9NSE2 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CISHQ9NSE2 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CISHQ9NSE2 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.11■□□□□ 0.65
CISHQ9NSE2 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CISHQ9NSE2 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CISHQ9NSE2 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CISHQ9NSE2 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.1■□□□□ 0.65
CISHQ9NSE2 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CISHQ9NSE2 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
CISHQ9NSE2 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.1■□□□□ 0.65
CISHQ9NSE2 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CISHQ9NSE2 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.1■□□□□ 0.65
CISHQ9NSE2 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CISHQ9NSE2 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.1■□□□□ 0.65
CISHQ9NSE2 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CISHQ9NSE2 AC009949.1-201ENST00000623048 1830 ntBASIC19.1■□□□□ 0.65
CISHQ9NSE2 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CISHQ9NSE2 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.1■□□□□ 0.65
CISHQ9NSE2 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.1■□□□□ 0.65
CISHQ9NSE2 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CISHQ9NSE2 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.1■□□□□ 0.65
CISHQ9NSE2 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CISHQ9NSE2 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.1■□□□□ 0.65
CISHQ9NSE2 TPSP2-201ENST00000561760 610 ntBASIC19.1■□□□□ 0.65
CISHQ9NSE2 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CISHQ9NSE2 MIR3180-1-201ENST00000580374 94 ntBASIC19.1■□□□□ 0.65
CISHQ9NSE2 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.1■□□□□ 0.65
CISHQ9NSE2 MIR3180-3-201ENST00000584616 94 ntBASIC19.1■□□□□ 0.65
CISHQ9NSE2 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.1■□□□□ 0.65
CISHQ9NSE2 AC093458.2-201ENST00000623150 629 ntBASIC19.1■□□□□ 0.65
CISHQ9NSE2 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.1■□□□□ 0.65
CISHQ9NSE2 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CISHQ9NSE2 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CISHQ9NSE2 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CISHQ9NSE2 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CISHQ9NSE2 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CISHQ9NSE2 AC006116.8-202ENST00000587620 1550 ntBASIC19.1■□□□□ 0.65
CISHQ9NSE2 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.1■□□□□ 0.65
CISHQ9NSE2 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CISHQ9NSE2 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CISHQ9NSE2 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.09■□□□□ 0.65
CISHQ9NSE2 AC067852.2-201ENST00000590513 2313 ntBASIC19.09■□□□□ 0.65
CISHQ9NSE2 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
CISHQ9NSE2 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.09■□□□□ 0.65
CISHQ9NSE2 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CISHQ9NSE2 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CISHQ9NSE2 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms