Protein–RNA interactions for Protein: Q9NP91

SLC6A20, Sodium- and chloride-dependent transporter XTRP3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20Q9NP91 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.23■□□□□ 0.35
SLC6A20Q9NP91 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC6A20Q9NP91 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC6A20Q9NP91 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
SLC6A20Q9NP91 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC6A20Q9NP91 AC007613.1-201ENST00000572811 2597 ntBASIC17.23■□□□□ 0.35
SLC6A20Q9NP91 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC6A20Q9NP91 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC6A20Q9NP91 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SLC6A20Q9NP91 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC6A20Q9NP91 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A20Q9NP91 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A20Q9NP91 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A20Q9NP91 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A20Q9NP91 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A20Q9NP91 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A20Q9NP91 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A20Q9NP91 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.22■□□□□ 0.35
SLC6A20Q9NP91 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC6A20Q9NP91 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A20Q9NP91 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A20Q9NP91 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
SLC6A20Q9NP91 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC6A20Q9NP91 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A20Q9NP91 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A20Q9NP91 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
SLC6A20Q9NP91 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A20Q9NP91 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SLC6A20Q9NP91 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A20Q9NP91 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A20Q9NP91 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.22■□□□□ 0.35
SLC6A20Q9NP91 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC6A20Q9NP91 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.22■□□□□ 0.35
SLC6A20Q9NP91 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.22■□□□□ 0.35
SLC6A20Q9NP91 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A20Q9NP91 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.22■□□□□ 0.35
SLC6A20Q9NP91 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A20Q9NP91 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A20Q9NP91 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.22■□□□□ 0.35
SLC6A20Q9NP91 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A20Q9NP91 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A20Q9NP91 NOC2LP1-202ENST00000452600 2235 ntBASIC17.22■□□□□ 0.35
SLC6A20Q9NP91 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A20Q9NP91 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A20Q9NP91 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A20Q9NP91 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A20Q9NP91 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A20Q9NP91 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A20Q9NP91 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC6A20Q9NP91 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC6A20Q9NP91 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.22■□□□□ 0.35
SLC6A20Q9NP91 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.22■□□□□ 0.35
SLC6A20Q9NP91 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A20Q9NP91 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A20Q9NP91 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SLC6A20Q9NP91 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A20Q9NP91 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A20Q9NP91 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A20Q9NP91 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A20Q9NP91 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A20Q9NP91 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A20Q9NP91 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A20Q9NP91 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
SLC6A20Q9NP91 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC6A20Q9NP91 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SLC6A20Q9NP91 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A20Q9NP91 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A20Q9NP91 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A20Q9NP91 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A20Q9NP91 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A20Q9NP91 AC246785.2-201ENST00000432512 513 ntBASIC17.21■□□□□ 0.35
SLC6A20Q9NP91 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC6A20Q9NP91 AP000867.3-201ENST00000524675 377 ntBASIC17.21■□□□□ 0.35
SLC6A20Q9NP91 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
SLC6A20Q9NP91 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.21■□□□□ 0.35
SLC6A20Q9NP91 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.21■□□□□ 0.35
SLC6A20Q9NP91 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC6A20Q9NP91 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.21■□□□□ 0.35
SLC6A20Q9NP91 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A20Q9NP91 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A20Q9NP91 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A20Q9NP91 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC6A20Q9NP91 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
SLC6A20Q9NP91 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SLC6A20Q9NP91 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.21■□□□□ 0.34
SLC6A20Q9NP91 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SLC6A20Q9NP91 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC6A20Q9NP91 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC6A20Q9NP91 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.2■□□□□ 0.34
SLC6A20Q9NP91 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC6A20Q9NP91 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC6A20Q9NP91 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SLC6A20Q9NP91 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.2■□□□□ 0.34
SLC6A20Q9NP91 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC6A20Q9NP91 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC6A20Q9NP91 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC6A20Q9NP91 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC6A20Q9NP91 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC6A20Q9NP91 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC6A20Q9NP91 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms