Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20AQ9NP66 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
HMG20AQ9NP66 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20AQ9NP66 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.34■□□□□ 0.21
HMG20AQ9NP66 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20AQ9NP66 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20AQ9NP66 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20AQ9NP66 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20AQ9NP66 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.34■□□□□ 0.21
HMG20AQ9NP66 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20AQ9NP66 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20AQ9NP66 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
HMG20AQ9NP66 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.34■□□□□ 0.21
HMG20AQ9NP66 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20AQ9NP66 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20AQ9NP66 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20AQ9NP66 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20AQ9NP66 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.34■□□□□ 0.21
HMG20AQ9NP66 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.34■□□□□ 0.21
HMG20AQ9NP66 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.34■□□□□ 0.21
HMG20AQ9NP66 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.34■□□□□ 0.21
HMG20AQ9NP66 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.34■□□□□ 0.21
HMG20AQ9NP66 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.34■□□□□ 0.21
HMG20AQ9NP66 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20AQ9NP66 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
HMG20AQ9NP66 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20AQ9NP66 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20AQ9NP66 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20AQ9NP66 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20AQ9NP66 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
HMG20AQ9NP66 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20AQ9NP66 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.34■□□□□ 0.21
HMG20AQ9NP66 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.34■□□□□ 0.21
HMG20AQ9NP66 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20AQ9NP66 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20AQ9NP66 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
HMG20AQ9NP66 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
HMG20AQ9NP66 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20AQ9NP66 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
HMG20AQ9NP66 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20AQ9NP66 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HMG20AQ9NP66 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HMG20AQ9NP66 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HMG20AQ9NP66 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
HMG20AQ9NP66 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
HMG20AQ9NP66 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HMG20AQ9NP66 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.33■□□□□ 0.21
HMG20AQ9NP66 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HMG20AQ9NP66 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.33■□□□□ 0.21
HMG20AQ9NP66 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
HMG20AQ9NP66 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.33■□□□□ 0.21
HMG20AQ9NP66 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HMG20AQ9NP66 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMG20AQ9NP66 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMG20AQ9NP66 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.33■□□□□ 0.2
HMG20AQ9NP66 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMG20AQ9NP66 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMG20AQ9NP66 ID1-201ENST00000376105 1233 ntBASIC16.33■□□□□ 0.2
HMG20AQ9NP66 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HMG20AQ9NP66 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.33■□□□□ 0.2
HMG20AQ9NP66 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMG20AQ9NP66 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.33■□□□□ 0.2
HMG20AQ9NP66 PRKY-204ENST00000533551 1019 ntBASIC16.33■□□□□ 0.2
HMG20AQ9NP66 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HMG20AQ9NP66 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.33■□□□□ 0.2
HMG20AQ9NP66 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMG20AQ9NP66 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMG20AQ9NP66 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.33■□□□□ 0.2
HMG20AQ9NP66 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMG20AQ9NP66 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.33■□□□□ 0.2
HMG20AQ9NP66 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
HMG20AQ9NP66 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMG20AQ9NP66 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HMG20AQ9NP66 AC112777.1-201ENST00000540175 1423 ntBASIC16.33■□□□□ 0.2
HMG20AQ9NP66 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.33■□□□□ 0.2
HMG20AQ9NP66 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
HMG20AQ9NP66 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
HMG20AQ9NP66 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMG20AQ9NP66 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMG20AQ9NP66 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMG20AQ9NP66 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HMG20AQ9NP66 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMG20AQ9NP66 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMG20AQ9NP66 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.33■□□□□ 0.2
HMG20AQ9NP66 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMG20AQ9NP66 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMG20AQ9NP66 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMG20AQ9NP66 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.32■□□□□ 0.2
HMG20AQ9NP66 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMG20AQ9NP66 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMG20AQ9NP66 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
HMG20AQ9NP66 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
HMG20AQ9NP66 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HMG20AQ9NP66 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMG20AQ9NP66 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMG20AQ9NP66 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMG20AQ9NP66 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMG20AQ9NP66 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMG20AQ9NP66 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HMG20AQ9NP66 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms