Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.7■□□□□ 0.58
CSNK1G1Q9HCP0 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CSNK1G1Q9HCP0 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CSNK1G1Q9HCP0 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CSNK1G1Q9HCP0 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CSNK1G1Q9HCP0 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.7■□□□□ 0.58
CSNK1G1Q9HCP0 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CSNK1G1Q9HCP0 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.7■□□□□ 0.58
CSNK1G1Q9HCP0 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CSNK1G1Q9HCP0 NEFHP1-201ENST00000412845 2629 ntBASIC18.7■□□□□ 0.58
CSNK1G1Q9HCP0 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CSNK1G1Q9HCP0 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.7■□□□□ 0.58
CSNK1G1Q9HCP0 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.7■□□□□ 0.58
CSNK1G1Q9HCP0 SLC25A6P5-201ENST00000435663 894 ntBASIC18.7■□□□□ 0.58
CSNK1G1Q9HCP0 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.7■□□□□ 0.58
CSNK1G1Q9HCP0 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.7■□□□□ 0.58
CSNK1G1Q9HCP0 AC106795.1-205ENST00000512851 1056 ntBASIC18.7■□□□□ 0.58
CSNK1G1Q9HCP0 AF238378.1-201ENST00000526806 358 ntBASIC18.7■□□□□ 0.58
CSNK1G1Q9HCP0 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.7■□□□□ 0.58
CSNK1G1Q9HCP0 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.7■□□□□ 0.58
CSNK1G1Q9HCP0 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
CSNK1G1Q9HCP0 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CSNK1G1Q9HCP0 AL390961.4-201ENST00000623958 2535 ntBASIC18.7■□□□□ 0.58
CSNK1G1Q9HCP0 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CSNK1G1Q9HCP0 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CSNK1G1Q9HCP0 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.7■□□□□ 0.58
CSNK1G1Q9HCP0 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.7■□□□□ 0.58
CSNK1G1Q9HCP0 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
CSNK1G1Q9HCP0 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CSNK1G1Q9HCP0 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.7■□□□□ 0.58
CSNK1G1Q9HCP0 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CSNK1G1Q9HCP0 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.69■□□□□ 0.58
CSNK1G1Q9HCP0 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSNK1G1Q9HCP0 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSNK1G1Q9HCP0 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSNK1G1Q9HCP0 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSNK1G1Q9HCP0 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSNK1G1Q9HCP0 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSNK1G1Q9HCP0 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.69■□□□□ 0.58
CSNK1G1Q9HCP0 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSNK1G1Q9HCP0 ABCD1P5-201ENST00000445663 754 ntBASIC18.69■□□□□ 0.58
CSNK1G1Q9HCP0 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.69■□□□□ 0.58
CSNK1G1Q9HCP0 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.69■□□□□ 0.58
CSNK1G1Q9HCP0 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.69■□□□□ 0.58
CSNK1G1Q9HCP0 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSNK1G1Q9HCP0 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.69■□□□□ 0.58
CSNK1G1Q9HCP0 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.69■□□□□ 0.58
CSNK1G1Q9HCP0 AC104692.2-201ENST00000603054 253 ntBASIC18.69■□□□□ 0.58
CSNK1G1Q9HCP0 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.69■□□□□ 0.58
CSNK1G1Q9HCP0 AP001269.4-201ENST00000609611 512 ntBASIC18.69■□□□□ 0.58
CSNK1G1Q9HCP0 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSNK1G1Q9HCP0 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSNK1G1Q9HCP0 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CSNK1G1Q9HCP0 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSNK1G1Q9HCP0 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CSNK1G1Q9HCP0 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CSNK1G1Q9HCP0 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
CSNK1G1Q9HCP0 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CSNK1G1Q9HCP0 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSNK1G1Q9HCP0 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CSNK1G1Q9HCP0 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSNK1G1Q9HCP0 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSNK1G1Q9HCP0 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.68■□□□□ 0.58
CSNK1G1Q9HCP0 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSNK1G1Q9HCP0 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.68■□□□□ 0.58
CSNK1G1Q9HCP0 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.68■□□□□ 0.58
CSNK1G1Q9HCP0 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
CSNK1G1Q9HCP0 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSNK1G1Q9HCP0 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSNK1G1Q9HCP0 RBM17P3-201ENST00000417687 1192 ntBASIC18.68■□□□□ 0.58
CSNK1G1Q9HCP0 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.68■□□□□ 0.58
CSNK1G1Q9HCP0 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.68■□□□□ 0.58
CSNK1G1Q9HCP0 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.68■□□□□ 0.58
CSNK1G1Q9HCP0 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CSNK1G1Q9HCP0 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.68■□□□□ 0.58
CSNK1G1Q9HCP0 AD001527.2-201ENST00000622994 785 ntBASIC18.68■□□□□ 0.58
CSNK1G1Q9HCP0 AP000867.4-201ENST00000641616 219 ntBASIC18.68■□□□□ 0.58
CSNK1G1Q9HCP0 BX276092.7-203ENST00000637198 1536 ntBASIC18.68■□□□□ 0.58
CSNK1G1Q9HCP0 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CSNK1G1Q9HCP0 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSNK1G1Q9HCP0 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSNK1G1Q9HCP0 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSNK1G1Q9HCP0 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSNK1G1Q9HCP0 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1G1Q9HCP0 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1G1Q9HCP0 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1G1Q9HCP0 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.67■□□□□ 0.58
CSNK1G1Q9HCP0 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1G1Q9HCP0 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
CSNK1G1Q9HCP0 AP005117.1-201ENST00000584346 1413 ntBASIC18.67■□□□□ 0.58
CSNK1G1Q9HCP0 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CSNK1G1Q9HCP0 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1G1Q9HCP0 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1G1Q9HCP0 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1G1Q9HCP0 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
CSNK1G1Q9HCP0 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1G1Q9HCP0 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1G1Q9HCP0 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1G1Q9HCP0 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1G1Q9HCP0 AC103564.2-201ENST00000432853 1299 ntBASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms