Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
VPS11Q9H270 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VPS11Q9H270 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.07■□□□□ 0.48
VPS11Q9H270 AP003071.4-201ENST00000562276 1284 ntBASIC18.07■□□□□ 0.48
VPS11Q9H270 AL353719.1-201ENST00000566847 864 ntBASIC18.07■□□□□ 0.48
VPS11Q9H270 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.07■□□□□ 0.48
VPS11Q9H270 AL023803.3-201ENST00000615559 522 ntBASIC18.07■□□□□ 0.48
VPS11Q9H270 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
VPS11Q9H270 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
VPS11Q9H270 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VPS11Q9H270 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.07■□□□□ 0.48
VPS11Q9H270 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.07■□□□□ 0.48
VPS11Q9H270 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VPS11Q9H270 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VPS11Q9H270 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VPS11Q9H270 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
VPS11Q9H270 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VPS11Q9H270 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
VPS11Q9H270 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VPS11Q9H270 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
VPS11Q9H270 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS11Q9H270 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.06■□□□□ 0.48
VPS11Q9H270 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VPS11Q9H270 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
VPS11Q9H270 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS11Q9H270 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS11Q9H270 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.06■□□□□ 0.48
VPS11Q9H270 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS11Q9H270 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.06■□□□□ 0.48
VPS11Q9H270 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.06■□□□□ 0.48
VPS11Q9H270 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VPS11Q9H270 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VPS11Q9H270 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VPS11Q9H270 SLC25A1P2-201ENST00000430693 912 ntBASIC18.06■□□□□ 0.48
VPS11Q9H270 TSPY17P-201ENST00000450329 467 ntBASIC18.06■□□□□ 0.48
VPS11Q9H270 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VPS11Q9H270 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
VPS11Q9H270 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS11Q9H270 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VPS11Q9H270 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VPS11Q9H270 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.06■□□□□ 0.48
VPS11Q9H270 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS11Q9H270 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS11Q9H270 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
VPS11Q9H270 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS11Q9H270 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS11Q9H270 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS11Q9H270 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.06■□□□□ 0.48
VPS11Q9H270 AC011676.5-201ENST00000624864 2660 ntBASIC18.06■□□□□ 0.48
VPS11Q9H270 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VPS11Q9H270 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
VPS11Q9H270 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VPS11Q9H270 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VPS11Q9H270 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
VPS11Q9H270 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
VPS11Q9H270 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VPS11Q9H270 AL138688.1-201ENST00000624851 1594 ntBASIC18.05■□□□□ 0.48
VPS11Q9H270 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VPS11Q9H270 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.05■□□□□ 0.48
VPS11Q9H270 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VPS11Q9H270 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VPS11Q9H270 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.05■□□□□ 0.48
VPS11Q9H270 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VPS11Q9H270 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VPS11Q9H270 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VPS11Q9H270 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VPS11Q9H270 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VPS11Q9H270 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VPS11Q9H270 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
VPS11Q9H270 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VPS11Q9H270 AC009065.1-201ENST00000564055 1225 ntBASIC18.05■□□□□ 0.48
VPS11Q9H270 WWOX-216ENST00000569818 525 ntBASIC18.05■□□□□ 0.48
VPS11Q9H270 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
VPS11Q9H270 AC112497.1-201ENST00000624824 639 ntBASIC18.05■□□□□ 0.48
VPS11Q9H270 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VPS11Q9H270 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
VPS11Q9H270 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VPS11Q9H270 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.05■□□□□ 0.48
VPS11Q9H270 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
VPS11Q9H270 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
VPS11Q9H270 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VPS11Q9H270 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
VPS11Q9H270 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
VPS11Q9H270 TNRC18P3-201ENST00000441896 2691 ntBASIC18.05■□□□□ 0.48
VPS11Q9H270 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.05■□□□□ 0.48
VPS11Q9H270 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
VPS11Q9H270 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VPS11Q9H270 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
VPS11Q9H270 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.04■□□□□ 0.48
VPS11Q9H270 AL355312.1-201ENST00000407115 2176 ntBASIC18.04■□□□□ 0.48
VPS11Q9H270 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
VPS11Q9H270 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VPS11Q9H270 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VPS11Q9H270 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.04■□□□□ 0.48
VPS11Q9H270 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.04■□□□□ 0.48
VPS11Q9H270 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
VPS11Q9H270 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VPS11Q9H270 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
VPS11Q9H270 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VPS11Q9H270 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms