Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 AC093512.1-201ENST00000617969 520 ntBASIC19.72■□□□□ 0.75
UBE2OQ9C0C9 AL513190.1-201ENST00000621254 727 ntBASIC19.72■□□□□ 0.75
UBE2OQ9C0C9 AL032819.2-201ENST00000624543 2162 ntBASIC19.72■□□□□ 0.75
UBE2OQ9C0C9 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
UBE2OQ9C0C9 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBE2OQ9C0C9 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.72■□□□□ 0.75
UBE2OQ9C0C9 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBE2OQ9C0C9 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
UBE2OQ9C0C9 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBE2OQ9C0C9 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBE2OQ9C0C9 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.72■□□□□ 0.75
UBE2OQ9C0C9 AC005332.7-201ENST00000614046 2005 ntBASIC19.71■□□□□ 0.75
UBE2OQ9C0C9 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBE2OQ9C0C9 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBE2OQ9C0C9 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UBE2OQ9C0C9 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.71■□□□□ 0.75
UBE2OQ9C0C9 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBE2OQ9C0C9 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
UBE2OQ9C0C9 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.71■□□□□ 0.75
UBE2OQ9C0C9 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
UBE2OQ9C0C9 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.71■□□□□ 0.75
UBE2OQ9C0C9 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UBE2OQ9C0C9 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UBE2OQ9C0C9 MTCL1P1-201ENST00000446207 792 ntBASIC19.71■□□□□ 0.75
UBE2OQ9C0C9 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.71■□□□□ 0.75
UBE2OQ9C0C9 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.71■□□□□ 0.75
UBE2OQ9C0C9 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.71■□□□□ 0.75
UBE2OQ9C0C9 AC190387.1-201ENST00000551683 408 ntBASIC19.71■□□□□ 0.75
UBE2OQ9C0C9 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.71■□□□□ 0.75
UBE2OQ9C0C9 AL035252.4-201ENST00000624174 288 ntBASIC19.71■□□□□ 0.75
UBE2OQ9C0C9 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
UBE2OQ9C0C9 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.71■□□□□ 0.75
UBE2OQ9C0C9 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.71■□□□□ 0.75
UBE2OQ9C0C9 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBE2OQ9C0C9 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
UBE2OQ9C0C9 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBE2OQ9C0C9 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.7■□□□□ 0.74
UBE2OQ9C0C9 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBE2OQ9C0C9 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBE2OQ9C0C9 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBE2OQ9C0C9 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBE2OQ9C0C9 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBE2OQ9C0C9 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
UBE2OQ9C0C9 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBE2OQ9C0C9 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.7■□□□□ 0.74
UBE2OQ9C0C9 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.7■□□□□ 0.74
UBE2OQ9C0C9 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBE2OQ9C0C9 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBE2OQ9C0C9 PRSS29P-201ENST00000440800 595 ntBASIC19.7■□□□□ 0.74
UBE2OQ9C0C9 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.7■□□□□ 0.74
UBE2OQ9C0C9 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.7■□□□□ 0.74
UBE2OQ9C0C9 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.7■□□□□ 0.74
UBE2OQ9C0C9 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.7■□□□□ 0.74
UBE2OQ9C0C9 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.7■□□□□ 0.74
UBE2OQ9C0C9 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.7■□□□□ 0.74
UBE2OQ9C0C9 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBE2OQ9C0C9 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBE2OQ9C0C9 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
UBE2OQ9C0C9 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.7■□□□□ 0.74
UBE2OQ9C0C9 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBE2OQ9C0C9 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBE2OQ9C0C9 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBE2OQ9C0C9 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.7■□□□□ 0.74
UBE2OQ9C0C9 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBE2OQ9C0C9 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBE2OQ9C0C9 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBE2OQ9C0C9 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.7■□□□□ 0.74
UBE2OQ9C0C9 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBE2OQ9C0C9 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBE2OQ9C0C9 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBE2OQ9C0C9 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBE2OQ9C0C9 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.69■□□□□ 0.74
UBE2OQ9C0C9 KRT8P50-201ENST00000562022 1438 ntBASIC19.69■□□□□ 0.74
UBE2OQ9C0C9 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UBE2OQ9C0C9 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBE2OQ9C0C9 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UBE2OQ9C0C9 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBE2OQ9C0C9 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
UBE2OQ9C0C9 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBE2OQ9C0C9 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UBE2OQ9C0C9 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBE2OQ9C0C9 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.69■□□□□ 0.74
UBE2OQ9C0C9 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.69■□□□□ 0.74
UBE2OQ9C0C9 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.69■□□□□ 0.74
UBE2OQ9C0C9 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.69■□□□□ 0.74
UBE2OQ9C0C9 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.69■□□□□ 0.74
UBE2OQ9C0C9 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC19.69■□□□□ 0.74
UBE2OQ9C0C9 RBM7-207ENST00000544582 692 ntTSL 3 BASIC19.69■□□□□ 0.74
UBE2OQ9C0C9 AC004449.1-201ENST00000564240 433 ntBASIC19.69■□□□□ 0.74
UBE2OQ9C0C9 MIR4745-201ENST00000577608 62 ntBASIC19.69■□□□□ 0.74
UBE2OQ9C0C9 AC006557.2-201ENST00000592985 1240 ntBASIC19.69■□□□□ 0.74
UBE2OQ9C0C9 AP000867.4-201ENST00000641616 219 ntBASIC19.69■□□□□ 0.74
UBE2OQ9C0C9 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBE2OQ9C0C9 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBE2OQ9C0C9 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBE2OQ9C0C9 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.69■□□□□ 0.74
UBE2OQ9C0C9 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBE2OQ9C0C9 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBE2OQ9C0C9 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBE2OQ9C0C9 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms