Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP4-1Q9BYQ7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP4-1Q9BYQ7 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC9.24□□□□□ -0.93
KRTAP4-1Q9BYQ7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC9.24□□□□□ -0.93
KRTAP4-1Q9BYQ7 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC9.24□□□□□ -0.93
KRTAP4-1Q9BYQ7 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC9.24□□□□□ -0.93
KRTAP4-1Q9BYQ7 AL020989.1-201ENST00000422979 469 ntBASIC9.24□□□□□ -0.93
KRTAP4-1Q9BYQ7 AL645939.2-201ENST00000427340 991 ntBASIC9.24□□□□□ -0.93
KRTAP4-1Q9BYQ7 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC9.24□□□□□ -0.93
KRTAP4-1Q9BYQ7 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP4-1Q9BYQ7 CEND1P1-201ENST00000451006 455 ntBASIC9.24□□□□□ -0.93
KRTAP4-1Q9BYQ7 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC9.24□□□□□ -0.93
KRTAP4-1Q9BYQ7 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC9.24□□□□□ -0.93
KRTAP4-1Q9BYQ7 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC9.24□□□□□ -0.93
KRTAP4-1Q9BYQ7 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC9.24□□□□□ -0.93
KRTAP4-1Q9BYQ7 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC9.24□□□□□ -0.93
KRTAP4-1Q9BYQ7 RIN3-211ENST00000557762 517 ntTSL 3 BASIC9.24□□□□□ -0.93
KRTAP4-1Q9BYQ7 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC9.24□□□□□ -0.93
KRTAP4-1Q9BYQ7 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC9.24□□□□□ -0.93
KRTAP4-1Q9BYQ7 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC9.24□□□□□ -0.93
KRTAP4-1Q9BYQ7 AC008667.4-201ENST00000607370 168 ntBASIC9.24□□□□□ -0.93
KRTAP4-1Q9BYQ7 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC9.24□□□□□ -0.93
KRTAP4-1Q9BYQ7 AC019129.2-201ENST00000609837 1235 ntBASIC9.24□□□□□ -0.93
KRTAP4-1Q9BYQ7 AC093028.1-201ENST00000622998 982 ntBASIC9.24□□□□□ -0.93
KRTAP4-1Q9BYQ7 AC010507.1-201ENST00000633895 436 ntBASIC9.24□□□□□ -0.93
KRTAP4-1Q9BYQ7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC9.24□□□□□ -0.93
KRTAP4-1Q9BYQ7 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP4-1Q9BYQ7 ELL2P1-201ENST00000413990 1906 ntBASIC9.24□□□□□ -0.93
KRTAP4-1Q9BYQ7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP4-1Q9BYQ7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP4-1Q9BYQ7 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC9.24□□□□□ -0.93
KRTAP4-1Q9BYQ7 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP4-1Q9BYQ7 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP4-1Q9BYQ7 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC9.24□□□□□ -0.93
KRTAP4-1Q9BYQ7 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP4-1Q9BYQ7 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC9.24□□□□□ -0.93
KRTAP4-1Q9BYQ7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
KRTAP4-1Q9BYQ7 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC9.24□□□□□ -0.93
KRTAP4-1Q9BYQ7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP4-1Q9BYQ7 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP4-1Q9BYQ7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP4-1Q9BYQ7 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 CFL1-212ENST00000531413 636 ntTSL 3 BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 PUS1-205ENST00000535067 838 ntTSL 3 BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 AP002472.1-201ENST00000577490 586 ntBASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 AC004877.2-201ENST00000623941 599 ntBASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 AC100803.2-201ENST00000562459 1963 ntBASIC9.23□□□□□ -0.93
KRTAP4-1Q9BYQ7 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
KRTAP4-1Q9BYQ7 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
KRTAP4-1Q9BYQ7 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
KRTAP4-1Q9BYQ7 AL031598.1-201ENST00000561511 1773 ntBASIC9.22□□□□□ -0.93
KRTAP4-1Q9BYQ7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC9.22□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms