Protein–RNA interactions for Protein: Q9BYQ3

KRTAP9-3, Keratin-associated protein 9-3, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP9-3Q9BYQ3 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
KRTAP9-3Q9BYQ3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
KRTAP9-3Q9BYQ3 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
KRTAP9-3Q9BYQ3 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC8.22□□□□□ -1.09
KRTAP9-3Q9BYQ3 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
KRTAP9-3Q9BYQ3 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
KRTAP9-3Q9BYQ3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC8.21□□□□□ -1.09
KRTAP9-3Q9BYQ3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
KRTAP9-3Q9BYQ3 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
KRTAP9-3Q9BYQ3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC8.21□□□□□ -1.09
KRTAP9-3Q9BYQ3 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
KRTAP9-3Q9BYQ3 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC8.21□□□□□ -1.09
KRTAP9-3Q9BYQ3 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
KRTAP9-3Q9BYQ3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
KRTAP9-3Q9BYQ3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC8.21□□□□□ -1.09
KRTAP9-3Q9BYQ3 ADK-206ENST00000541550 2222 ntTSL 2 BASIC8.21□□□□□ -1.09
KRTAP9-3Q9BYQ3 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
KRTAP9-3Q9BYQ3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC8.21□□□□□ -1.09
KRTAP9-3Q9BYQ3 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 CALY-203ENST00000368558 825 ntTSL 5 BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 FAM8A3P-201ENST00000427218 844 ntBASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 AL645939.2-201ENST00000427340 991 ntBASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 AC007967.3-201ENST00000434308 558 ntBASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 AC108751.1-201ENST00000490852 363 ntBASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 AC104123.1-203ENST00000513158 575 ntTSL 3 BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 SNHG9-202ENST00000564014 471 ntBASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 SDCCAG3P1-201ENST00000589292 1150 ntBASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 AP001442.1-203ENST00000596385 876 ntTSL 5 BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 AC110760.3-201ENST00000598794 467 ntBASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 AC012557.2-201ENST00000605919 418 ntBASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 AC063944.3-201ENST00000609969 533 ntBASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 AC005593.1-201ENST00000624894 515 ntBASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 MYLKP1-201ENST00000509077 1580 ntBASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 AC004817.3-201ENST00000602957 2129 ntBASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 AC002310.6-201ENST00000624451 1377 ntBASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC8.21□□□□□ -1.1
KRTAP9-3Q9BYQ3 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP9-3Q9BYQ3 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC8.2□□□□□ -1.1
KRTAP9-3Q9BYQ3 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP9-3Q9BYQ3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP9-3Q9BYQ3 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP9-3Q9BYQ3 MED29-202ENST00000594368 1471 ntTSL 2 BASIC8.2□□□□□ -1.1
KRTAP9-3Q9BYQ3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP9-3Q9BYQ3 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP9-3Q9BYQ3 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP9-3Q9BYQ3 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP9-3Q9BYQ3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC8.2□□□□□ -1.1
KRTAP9-3Q9BYQ3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP9-3Q9BYQ3 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC8.2□□□□□ -1.1
KRTAP9-3Q9BYQ3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC8.2□□□□□ -1.1
KRTAP9-3Q9BYQ3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP9-3Q9BYQ3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
KRTAP9-3Q9BYQ3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP9-3Q9BYQ3 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP9-3Q9BYQ3 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP9-3Q9BYQ3 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP9-3Q9BYQ3 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP9-3Q9BYQ3 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms