Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 PCDH8P1-201ENST00000428983 2773 ntBASIC17.49■□□□□ 0.39
EBF4Q9BQW3 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
EBF4Q9BQW3 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.49■□□□□ 0.39
EBF4Q9BQW3 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
EBF4Q9BQW3 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
EBF4Q9BQW3 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
EBF4Q9BQW3 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
EBF4Q9BQW3 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
EBF4Q9BQW3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EBF4Q9BQW3 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EBF4Q9BQW3 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EBF4Q9BQW3 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
EBF4Q9BQW3 AL139384.1-201ENST00000612143 3047 ntBASIC17.48■□□□□ 0.39
EBF4Q9BQW3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
EBF4Q9BQW3 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EBF4Q9BQW3 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
EBF4Q9BQW3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
EBF4Q9BQW3 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
EBF4Q9BQW3 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EBF4Q9BQW3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EBF4Q9BQW3 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.48■□□□□ 0.39
EBF4Q9BQW3 FAM197Y1-201ENST00000421178 764 ntBASIC17.48■□□□□ 0.39
EBF4Q9BQW3 CA15P1-201ENST00000481698 905 ntBASIC17.48■□□□□ 0.39
EBF4Q9BQW3 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.48■□□□□ 0.39
EBF4Q9BQW3 RARRES2P10-201ENST00000564312 460 ntBASIC17.48■□□□□ 0.39
EBF4Q9BQW3 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.48■□□□□ 0.39
EBF4Q9BQW3 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.48■□□□□ 0.39
EBF4Q9BQW3 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.48■□□□□ 0.39
EBF4Q9BQW3 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EBF4Q9BQW3 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
EBF4Q9BQW3 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.48■□□□□ 0.39
EBF4Q9BQW3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
EBF4Q9BQW3 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EBF4Q9BQW3 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
EBF4Q9BQW3 AC105020.1-201ENST00000435356 2205 ntBASIC17.48■□□□□ 0.39
EBF4Q9BQW3 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.48■□□□□ 0.39
EBF4Q9BQW3 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
EBF4Q9BQW3 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EBF4Q9BQW3 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
EBF4Q9BQW3 KRT8P7-201ENST00000533003 1432 ntBASIC17.47■□□□□ 0.39
EBF4Q9BQW3 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.47■□□□□ 0.39
EBF4Q9BQW3 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EBF4Q9BQW3 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EBF4Q9BQW3 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
EBF4Q9BQW3 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
EBF4Q9BQW3 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EBF4Q9BQW3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
EBF4Q9BQW3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
EBF4Q9BQW3 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.47■□□□□ 0.39
EBF4Q9BQW3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.47■□□□□ 0.39
EBF4Q9BQW3 HLA-L-209ENST00000420110 1011 ntBASIC17.47■□□□□ 0.39
EBF4Q9BQW3 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
EBF4Q9BQW3 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.47■□□□□ 0.39
EBF4Q9BQW3 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EBF4Q9BQW3 AC006058.3-201ENST00000606217 1069 ntBASIC17.47■□□□□ 0.39
EBF4Q9BQW3 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
EBF4Q9BQW3 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
EBF4Q9BQW3 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EBF4Q9BQW3 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.47■□□□□ 0.39
EBF4Q9BQW3 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
EBF4Q9BQW3 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
EBF4Q9BQW3 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
EBF4Q9BQW3 REXO1L11P-201ENST00000620964 1927 ntBASIC17.47■□□□□ 0.39
EBF4Q9BQW3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.47■□□□□ 0.39
EBF4Q9BQW3 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
EBF4Q9BQW3 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
EBF4Q9BQW3 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
EBF4Q9BQW3 PCDHA14-201ENST00000506751 2298 ntBASIC17.46■□□□□ 0.39
EBF4Q9BQW3 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
EBF4Q9BQW3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
EBF4Q9BQW3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
EBF4Q9BQW3 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
EBF4Q9BQW3 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
EBF4Q9BQW3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
EBF4Q9BQW3 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
EBF4Q9BQW3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.46■□□□□ 0.39
EBF4Q9BQW3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
EBF4Q9BQW3 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.46■□□□□ 0.39
EBF4Q9BQW3 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.46■□□□□ 0.39
EBF4Q9BQW3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.46■□□□□ 0.39
EBF4Q9BQW3 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
EBF4Q9BQW3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.46■□□□□ 0.39
EBF4Q9BQW3 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
EBF4Q9BQW3 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.46■□□□□ 0.39
EBF4Q9BQW3 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
EBF4Q9BQW3 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
EBF4Q9BQW3 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
EBF4Q9BQW3 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
EBF4Q9BQW3 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.46■□□□□ 0.39
EBF4Q9BQW3 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
EBF4Q9BQW3 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.46■□□□□ 0.39
EBF4Q9BQW3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
EBF4Q9BQW3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
EBF4Q9BQW3 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.46■□□□□ 0.38
EBF4Q9BQW3 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.38
EBF4Q9BQW3 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
EBF4Q9BQW3 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
EBF4Q9BQW3 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
EBF4Q9BQW3 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
EBF4Q9BQW3 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms