Protein–RNA interactions for Protein: Q99633

PRPF18, Pre-mRNA-splicing factor 18, humanhuman

Known RBP Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18Q99633 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
PRPF18Q99633 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.46■□□□□ 0.39
PRPF18Q99633 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.46■□□□□ 0.39
PRPF18Q99633 AL353719.1-201ENST00000566847 864 ntBASIC17.46■□□□□ 0.39
PRPF18Q99633 MIR4785-201ENST00000585005 73 ntBASIC17.46■□□□□ 0.39
PRPF18Q99633 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.46■□□□□ 0.39
PRPF18Q99633 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.46■□□□□ 0.39
PRPF18Q99633 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRPF18Q99633 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRPF18Q99633 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.46■□□□□ 0.39
PRPF18Q99633 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.46■□□□□ 0.39
PRPF18Q99633 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.46■□□□□ 0.39
PRPF18Q99633 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRPF18Q99633 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRPF18Q99633 AC022211.2-201ENST00000585075 2527 ntBASIC17.46■□□□□ 0.38
PRPF18Q99633 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
PRPF18Q99633 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PRPF18Q99633 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
PRPF18Q99633 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PRPF18Q99633 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.45■□□□□ 0.38
PRPF18Q99633 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.45■□□□□ 0.38
PRPF18Q99633 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PRPF18Q99633 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PRPF18Q99633 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRPF18Q99633 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRPF18Q99633 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRPF18Q99633 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRPF18Q99633 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PRPF18Q99633 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.45■□□□□ 0.38
PRPF18Q99633 KRT18P23-201ENST00000435622 1283 ntBASIC17.45■□□□□ 0.38
PRPF18Q99633 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.45■□□□□ 0.38
PRPF18Q99633 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.45■□□□□ 0.38
PRPF18Q99633 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.45■□□□□ 0.38
PRPF18Q99633 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.45■□□□□ 0.38
PRPF18Q99633 Z99916.2-201ENST00000604037 246 ntBASIC17.45■□□□□ 0.38
PRPF18Q99633 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PRPF18Q99633 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PRPF18Q99633 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRPF18Q99633 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.45■□□□□ 0.38
PRPF18Q99633 FER1L4-210ENST00000615531 5998 ntBASIC17.45■□□□□ 0.38
PRPF18Q99633 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PRPF18Q99633 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PRPF18Q99633 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRPF18Q99633 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PRPF18Q99633 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRPF18Q99633 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PRPF18Q99633 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PRPF18Q99633 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PRPF18Q99633 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRPF18Q99633 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRPF18Q99633 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PRPF18Q99633 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRPF18Q99633 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.44■□□□□ 0.38
PRPF18Q99633 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRPF18Q99633 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.44■□□□□ 0.38
PRPF18Q99633 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRPF18Q99633 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.44■□□□□ 0.38
PRPF18Q99633 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PRPF18Q99633 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRPF18Q99633 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
PRPF18Q99633 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRPF18Q99633 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.44■□□□□ 0.38
PRPF18Q99633 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.44■□□□□ 0.38
PRPF18Q99633 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.44■□□□□ 0.38
PRPF18Q99633 BX088651.1-201ENST00000540551 451 ntBASIC17.44■□□□□ 0.38
PRPF18Q99633 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.44■□□□□ 0.38
PRPF18Q99633 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRPF18Q99633 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.44■□□□□ 0.38
PRPF18Q99633 AL023803.3-201ENST00000615559 522 ntBASIC17.44■□□□□ 0.38
PRPF18Q99633 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.44■□□□□ 0.38
PRPF18Q99633 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PRPF18Q99633 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PRPF18Q99633 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRPF18Q99633 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRPF18Q99633 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRPF18Q99633 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRPF18Q99633 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRPF18Q99633 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.44■□□□□ 0.38
PRPF18Q99633 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.44■□□□□ 0.38
PRPF18Q99633 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.44■□□□□ 0.38
PRPF18Q99633 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.44■□□□□ 0.38
PRPF18Q99633 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRPF18Q99633 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
PRPF18Q99633 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRPF18Q99633 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PRPF18Q99633 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRPF18Q99633 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRPF18Q99633 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.43■□□□□ 0.38
PRPF18Q99633 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.43■□□□□ 0.38
PRPF18Q99633 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
PRPF18Q99633 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRPF18Q99633 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PRPF18Q99633 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRPF18Q99633 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRPF18Q99633 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRPF18Q99633 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.43■□□□□ 0.38
PRPF18Q99633 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRPF18Q99633 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRPF18Q99633 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.43■□□□□ 0.38
PRPF18Q99633 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms