Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.99■□□□□ 0.95
CDK5RAP2Q96SN8 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDK5RAP2Q96SN8 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CDK5RAP2Q96SN8 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CDK5RAP2Q96SN8 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.99■□□□□ 0.95
CDK5RAP2Q96SN8 AC005104.2-201ENST00000427818 678 ntBASIC20.99■□□□□ 0.95
CDK5RAP2Q96SN8 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.99■□□□□ 0.95
CDK5RAP2Q96SN8 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC20.99■□□□□ 0.95
CDK5RAP2Q96SN8 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.99■□□□□ 0.95
CDK5RAP2Q96SN8 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.99■□□□□ 0.95
CDK5RAP2Q96SN8 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.99■□□□□ 0.95
CDK5RAP2Q96SN8 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CDK5RAP2Q96SN8 AC010327.4-202ENST00000591484 748 ntBASIC20.99■□□□□ 0.95
CDK5RAP2Q96SN8 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDK5RAP2Q96SN8 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDK5RAP2Q96SN8 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.99■□□□□ 0.95
CDK5RAP2Q96SN8 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
CDK5RAP2Q96SN8 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDK5RAP2Q96SN8 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.99■□□□□ 0.95
CDK5RAP2Q96SN8 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDK5RAP2Q96SN8 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.99■□□□□ 0.95
CDK5RAP2Q96SN8 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.99■□□□□ 0.95
CDK5RAP2Q96SN8 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDK5RAP2Q96SN8 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.98■□□□□ 0.95
CDK5RAP2Q96SN8 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.98■□□□□ 0.95
CDK5RAP2Q96SN8 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.98■□□□□ 0.95
CDK5RAP2Q96SN8 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.98■□□□□ 0.95
CDK5RAP2Q96SN8 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.98■□□□□ 0.95
CDK5RAP2Q96SN8 AC073592.5-201ENST00000624854 528 ntBASIC20.98■□□□□ 0.95
CDK5RAP2Q96SN8 FAM215A-202ENST00000632077 792 ntBASIC20.98■□□□□ 0.95
CDK5RAP2Q96SN8 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDK5RAP2Q96SN8 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.98■□□□□ 0.95
CDK5RAP2Q96SN8 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDK5RAP2Q96SN8 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDK5RAP2Q96SN8 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.98■□□□□ 0.95
CDK5RAP2Q96SN8 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDK5RAP2Q96SN8 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDK5RAP2Q96SN8 AC138028.4-201ENST00000564984 1845 ntBASIC20.98■□□□□ 0.95
CDK5RAP2Q96SN8 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CDK5RAP2Q96SN8 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.98■□□□□ 0.95
CDK5RAP2Q96SN8 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDK5RAP2Q96SN8 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDK5RAP2Q96SN8 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDK5RAP2Q96SN8 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.98■□□□□ 0.95
CDK5RAP2Q96SN8 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
CDK5RAP2Q96SN8 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDK5RAP2Q96SN8 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.98■□□□□ 0.95
CDK5RAP2Q96SN8 SPDYE21P-201ENST00000413323 827 ntBASIC20.98■□□□□ 0.95
CDK5RAP2Q96SN8 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.98■□□□□ 0.95
CDK5RAP2Q96SN8 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.98■□□□□ 0.95
CDK5RAP2Q96SN8 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.98■□□□□ 0.95
CDK5RAP2Q96SN8 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CDK5RAP2Q96SN8 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.97■□□□□ 0.95
CDK5RAP2Q96SN8 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDK5RAP2Q96SN8 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDK5RAP2Q96SN8 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.97■□□□□ 0.95
CDK5RAP2Q96SN8 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CDK5RAP2Q96SN8 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CDK5RAP2Q96SN8 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDK5RAP2Q96SN8 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDK5RAP2Q96SN8 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.97■□□□□ 0.95
CDK5RAP2Q96SN8 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.97■□□□□ 0.95
CDK5RAP2Q96SN8 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CDK5RAP2Q96SN8 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.97■□□□□ 0.95
CDK5RAP2Q96SN8 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.97■□□□□ 0.95
CDK5RAP2Q96SN8 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.97■□□□□ 0.95
CDK5RAP2Q96SN8 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDK5RAP2Q96SN8 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
CDK5RAP2Q96SN8 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CDK5RAP2Q96SN8 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDK5RAP2Q96SN8 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.97■□□□□ 0.95
CDK5RAP2Q96SN8 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDK5RAP2Q96SN8 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDK5RAP2Q96SN8 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.97■□□□□ 0.95
CDK5RAP2Q96SN8 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDK5RAP2Q96SN8 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDK5RAP2Q96SN8 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.97■□□□□ 0.95
CDK5RAP2Q96SN8 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.96■□□□□ 0.95
CDK5RAP2Q96SN8 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.96■□□□□ 0.95
CDK5RAP2Q96SN8 ACTG1P4-201ENST00000425123 1122 ntBASIC20.96■□□□□ 0.95
CDK5RAP2Q96SN8 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDK5RAP2Q96SN8 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.96■□□□□ 0.95
CDK5RAP2Q96SN8 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CDK5RAP2Q96SN8 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.96■□□□□ 0.95
CDK5RAP2Q96SN8 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.96■□□□□ 0.95
CDK5RAP2Q96SN8 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.96■□□□□ 0.95
CDK5RAP2Q96SN8 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.96■□□□□ 0.95
CDK5RAP2Q96SN8 AC104581.1-202ENST00000635932 2618 ntBASIC20.96■□□□□ 0.95
CDK5RAP2Q96SN8 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.96■□□□□ 0.95
CDK5RAP2Q96SN8 FLJ13224-201ENST00000313737 1514 ntBASIC20.96■□□□□ 0.95
CDK5RAP2Q96SN8 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.96■□□□□ 0.95
CDK5RAP2Q96SN8 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDK5RAP2Q96SN8 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDK5RAP2Q96SN8 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.96■□□□□ 0.95
CDK5RAP2Q96SN8 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDK5RAP2Q96SN8 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDK5RAP2Q96SN8 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.96■□□□□ 0.95
CDK5RAP2Q96SN8 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CDK5RAP2Q96SN8 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDK5RAP2Q96SN8 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms