Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC21.82■■□□□ 1.08
CRAMP1Q96RY5 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC21.82■■□□□ 1.08
CRAMP1Q96RY5 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC21.82■■□□□ 1.08
CRAMP1Q96RY5 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC21.82■■□□□ 1.08
CRAMP1Q96RY5 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC21.82■■□□□ 1.08
CRAMP1Q96RY5 SIGLEC30P-201ENST00000455569 941 ntBASIC21.82■■□□□ 1.08
CRAMP1Q96RY5 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC21.82■■□□□ 1.08
CRAMP1Q96RY5 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC21.82■■□□□ 1.08
CRAMP1Q96RY5 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC21.82■■□□□ 1.08
CRAMP1Q96RY5 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CRAMP1Q96RY5 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CRAMP1Q96RY5 GID4-202ENST00000376345 1391 ntTSL 3 BASIC21.82■■□□□ 1.08
CRAMP1Q96RY5 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC21.82■■□□□ 1.08
CRAMP1Q96RY5 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.82■■□□□ 1.08
CRAMP1Q96RY5 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CRAMP1Q96RY5 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
CRAMP1Q96RY5 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CRAMP1Q96RY5 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CRAMP1Q96RY5 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CRAMP1Q96RY5 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CRAMP1Q96RY5 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CRAMP1Q96RY5 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.81■■□□□ 1.08
CRAMP1Q96RY5 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CRAMP1Q96RY5 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CRAMP1Q96RY5 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CRAMP1Q96RY5 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CRAMP1Q96RY5 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CRAMP1Q96RY5 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CRAMP1Q96RY5 AC003669.1-201ENST00000334569 611 ntBASIC21.81■■□□□ 1.08
CRAMP1Q96RY5 METTL21AP1-201ENST00000438852 635 ntBASIC21.81■■□□□ 1.08
CRAMP1Q96RY5 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
CRAMP1Q96RY5 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC21.81■■□□□ 1.08
CRAMP1Q96RY5 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC21.81■■□□□ 1.08
CRAMP1Q96RY5 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC21.81■■□□□ 1.08
CRAMP1Q96RY5 AC018845.2-201ENST00000568326 409 ntBASIC21.81■■□□□ 1.08
CRAMP1Q96RY5 MIR4751-201ENST00000578027 74 ntBASIC21.81■■□□□ 1.08
CRAMP1Q96RY5 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC21.81■■□□□ 1.08
CRAMP1Q96RY5 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CRAMP1Q96RY5 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CRAMP1Q96RY5 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CRAMP1Q96RY5 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CRAMP1Q96RY5 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
CRAMP1Q96RY5 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.81■■□□□ 1.08
CRAMP1Q96RY5 FUT8-AS1-201ENST00000621019 1521 ntBASIC21.8■■□□□ 1.08
CRAMP1Q96RY5 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CRAMP1Q96RY5 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC21.8■■□□□ 1.08
CRAMP1Q96RY5 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CRAMP1Q96RY5 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CRAMP1Q96RY5 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CRAMP1Q96RY5 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CRAMP1Q96RY5 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CRAMP1Q96RY5 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC21.8■■□□□ 1.08
CRAMP1Q96RY5 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
CRAMP1Q96RY5 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CRAMP1Q96RY5 KLF4P1-201ENST00000412782 1185 ntBASIC21.8■■□□□ 1.08
CRAMP1Q96RY5 MKNK2P1-201ENST00000437526 628 ntBASIC21.8■■□□□ 1.08
CRAMP1Q96RY5 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CRAMP1Q96RY5 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CRAMP1Q96RY5 CIPC-205ENST00000555437 566 ntTSL 3 BASIC21.8■■□□□ 1.08
CRAMP1Q96RY5 SNHG9-202ENST00000564014 471 ntBASIC21.8■■□□□ 1.08
CRAMP1Q96RY5 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
CRAMP1Q96RY5 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC21.8■■□□□ 1.08
CRAMP1Q96RY5 AC019129.2-201ENST00000609837 1235 ntBASIC21.8■■□□□ 1.08
CRAMP1Q96RY5 AL513190.1-201ENST00000621254 727 ntBASIC21.8■■□□□ 1.08
CRAMP1Q96RY5 AC004790.2-201ENST00000623588 572 ntBASIC21.8■■□□□ 1.08
CRAMP1Q96RY5 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CRAMP1Q96RY5 SP100-208ENST00000427101 1922 ntTSL 2 BASIC21.8■■□□□ 1.08
CRAMP1Q96RY5 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CRAMP1Q96RY5 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.8■■□□□ 1.08
CRAMP1Q96RY5 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CRAMP1Q96RY5 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CRAMP1Q96RY5 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC21.8■■□□□ 1.08
CRAMP1Q96RY5 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
CRAMP1Q96RY5 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CRAMP1Q96RY5 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC21.79■■□□□ 1.08
CRAMP1Q96RY5 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CRAMP1Q96RY5 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CRAMP1Q96RY5 HTR5BP-201ENST00000430851 1154 ntBASIC21.79■■□□□ 1.08
CRAMP1Q96RY5 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC21.79■■□□□ 1.08
CRAMP1Q96RY5 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC21.79■■□□□ 1.08
CRAMP1Q96RY5 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CRAMP1Q96RY5 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.79■■□□□ 1.08
CRAMP1Q96RY5 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CRAMP1Q96RY5 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CRAMP1Q96RY5 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
CRAMP1Q96RY5 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC21.79■■□□□ 1.08
CRAMP1Q96RY5 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.78■■□□□ 1.08
CRAMP1Q96RY5 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CRAMP1Q96RY5 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CRAMP1Q96RY5 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CRAMP1Q96RY5 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
CRAMP1Q96RY5 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CRAMP1Q96RY5 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CRAMP1Q96RY5 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC21.78■■□□□ 1.08
CRAMP1Q96RY5 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC21.78■■□□□ 1.08
CRAMP1Q96RY5 S100A2-206ENST00000497140 697 ntTSL 2 BASIC21.78■■□□□ 1.08
CRAMP1Q96RY5 MAL2-202ENST00000531508 892 ntTSL 3 BASIC21.78■■□□□ 1.08
CRAMP1Q96RY5 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC21.78■■□□□ 1.08
CRAMP1Q96RY5 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC21.78■■□□□ 1.08
CRAMP1Q96RY5 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms