Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.19■□□□□ 0.02
CSMD1Q96PZ7 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.19■□□□□ 0.02
CSMD1Q96PZ7 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.19■□□□□ 0.02
CSMD1Q96PZ7 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.19■□□□□ 0.02
CSMD1Q96PZ7 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.19■□□□□ 0.02
CSMD1Q96PZ7 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.19■□□□□ 0.02
CSMD1Q96PZ7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
CSMD1Q96PZ7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSMD1Q96PZ7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSMD1Q96PZ7 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSMD1Q96PZ7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSMD1Q96PZ7 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.18■□□□□ 0.02
CSMD1Q96PZ7 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CSMD1Q96PZ7 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC15.18■□□□□ 0.02
CSMD1Q96PZ7 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CSMD1Q96PZ7 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSMD1Q96PZ7 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.18■□□□□ 0.02
CSMD1Q96PZ7 ELK2BP-201ENST00000415014 1224 ntBASIC15.18■□□□□ 0.02
CSMD1Q96PZ7 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.18■□□□□ 0.02
CSMD1Q96PZ7 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CSMD1Q96PZ7 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CSMD1Q96PZ7 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.18■□□□□ 0.02
CSMD1Q96PZ7 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CSMD1Q96PZ7 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSMD1Q96PZ7 IRX1P1-201ENST00000438849 1838 ntBASIC15.18■□□□□ 0.02
CSMD1Q96PZ7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSMD1Q96PZ7 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSMD1Q96PZ7 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CSMD1Q96PZ7 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.18■□□□□ 0.02
CSMD1Q96PZ7 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.18■□□□□ 0.02
CSMD1Q96PZ7 AC006557.2-201ENST00000592985 1240 ntBASIC15.18■□□□□ 0.02
CSMD1Q96PZ7 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.18■□□□□ 0.02
CSMD1Q96PZ7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC15.18■□□□□ 0.02
CSMD1Q96PZ7 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSMD1Q96PZ7 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.18■□□□□ 0.02
CSMD1Q96PZ7 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSMD1Q96PZ7 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CSMD1Q96PZ7 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSMD1Q96PZ7 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSMD1Q96PZ7 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CSMD1Q96PZ7 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSMD1Q96PZ7 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSMD1Q96PZ7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC15.17■□□□□ 0.02
CSMD1Q96PZ7 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.17■□□□□ 0.02
CSMD1Q96PZ7 KRT8P50-201ENST00000562022 1438 ntBASIC15.17■□□□□ 0.02
CSMD1Q96PZ7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CSMD1Q96PZ7 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CSMD1Q96PZ7 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.17■□□□□ 0.02
CSMD1Q96PZ7 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSMD1Q96PZ7 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.17■□□□□ 0.02
CSMD1Q96PZ7 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.17■□□□□ 0.02
CSMD1Q96PZ7 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSMD1Q96PZ7 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC15.17■□□□□ 0.02
CSMD1Q96PZ7 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSMD1Q96PZ7 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSMD1Q96PZ7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CSMD1Q96PZ7 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSMD1Q96PZ7 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC15.17■□□□□ 0.02
CSMD1Q96PZ7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CSMD1Q96PZ7 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CSMD1Q96PZ7 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.17■□□□□ 0.02
CSMD1Q96PZ7 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
CSMD1Q96PZ7 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CSMD1Q96PZ7 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.17■□□□□ 0.02
CSMD1Q96PZ7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.17■□□□□ 0.02
CSMD1Q96PZ7 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CSMD1Q96PZ7 LINC00602-201ENST00000629776 2065 ntBASIC15.17■□□□□ 0.02
CSMD1Q96PZ7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSMD1Q96PZ7 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.17■□□□□ 0.02
CSMD1Q96PZ7 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSMD1Q96PZ7 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSMD1Q96PZ7 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CSMD1Q96PZ7 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.16■□□□□ 0.02
CSMD1Q96PZ7 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.16■□□□□ 0.02
CSMD1Q96PZ7 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.16■□□□□ 0.02
CSMD1Q96PZ7 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CSMD1Q96PZ7 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSMD1Q96PZ7 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.16■□□□□ 0.02
CSMD1Q96PZ7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.16■□□□□ 0.02
CSMD1Q96PZ7 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CSMD1Q96PZ7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CSMD1Q96PZ7 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CSMD1Q96PZ7 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.16■□□□□ 0.02
CSMD1Q96PZ7 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSMD1Q96PZ7 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.16■□□□□ 0.02
CSMD1Q96PZ7 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.16■□□□□ 0.02
CSMD1Q96PZ7 CRB3P1-201ENST00000449338 276 ntBASIC15.16■□□□□ 0.02
CSMD1Q96PZ7 AC113404.2-201ENST00000507884 177 ntBASIC15.16■□□□□ 0.02
CSMD1Q96PZ7 KRT19P2-202ENST00000557173 1012 ntBASIC15.16■□□□□ 0.02
CSMD1Q96PZ7 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.16■□□□□ 0.02
CSMD1Q96PZ7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CSMD1Q96PZ7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CSMD1Q96PZ7 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSMD1Q96PZ7 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.16■□□□□ 0.02
CSMD1Q96PZ7 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSMD1Q96PZ7 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
CSMD1Q96PZ7 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.16■□□□□ 0.02
CSMD1Q96PZ7 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSMD1Q96PZ7 AC055876.3-201ENST00000431496 288 ntBASIC15.16■□□□□ 0.02
CSMD1Q96PZ7 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms