Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.33■□□□□ 0.84
SYNGAP1Q96PV0 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.33■□□□□ 0.84
SYNGAP1Q96PV0 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SYNGAP1Q96PV0 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SYNGAP1Q96PV0 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.32■□□□□ 0.84
SYNGAP1Q96PV0 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.32■□□□□ 0.84
SYNGAP1Q96PV0 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SYNGAP1Q96PV0 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SYNGAP1Q96PV0 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SYNGAP1Q96PV0 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SYNGAP1Q96PV0 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SYNGAP1Q96PV0 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.32■□□□□ 0.84
SYNGAP1Q96PV0 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.32■□□□□ 0.84
SYNGAP1Q96PV0 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.32■□□□□ 0.84
SYNGAP1Q96PV0 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.32■□□□□ 0.84
SYNGAP1Q96PV0 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SYNGAP1Q96PV0 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SYNGAP1Q96PV0 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SYNGAP1Q96PV0 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SYNGAP1Q96PV0 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SYNGAP1Q96PV0 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SYNGAP1Q96PV0 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.32■□□□□ 0.84
SYNGAP1Q96PV0 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.32■□□□□ 0.84
SYNGAP1Q96PV0 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SYNGAP1Q96PV0 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SYNGAP1Q96PV0 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SYNGAP1Q96PV0 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SYNGAP1Q96PV0 HMGN1P19-201ENST00000436976 333 ntBASIC20.31■□□□□ 0.84
SYNGAP1Q96PV0 PGAM5P1-201ENST00000518923 814 ntBASIC20.31■□□□□ 0.84
SYNGAP1Q96PV0 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.31■□□□□ 0.84
SYNGAP1Q96PV0 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.31■□□□□ 0.84
SYNGAP1Q96PV0 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.31■□□□□ 0.84
SYNGAP1Q96PV0 AC027601.4-201ENST00000611259 610 ntBASIC20.31■□□□□ 0.84
SYNGAP1Q96PV0 FAM197Y3-203ENST00000618346 717 ntBASIC20.31■□□□□ 0.84
SYNGAP1Q96PV0 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.31■□□□□ 0.84
SYNGAP1Q96PV0 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.31■□□□□ 0.84
SYNGAP1Q96PV0 AC008735.5-201ENST00000623544 497 ntBASIC20.31■□□□□ 0.84
SYNGAP1Q96PV0 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.31■□□□□ 0.84
SYNGAP1Q96PV0 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SYNGAP1Q96PV0 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SYNGAP1Q96PV0 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SYNGAP1Q96PV0 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SYNGAP1Q96PV0 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SYNGAP1Q96PV0 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.31■□□□□ 0.84
SYNGAP1Q96PV0 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SYNGAP1Q96PV0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SYNGAP1Q96PV0 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SYNGAP1Q96PV0 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYNGAP1Q96PV0 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYNGAP1Q96PV0 FAM220CP-201ENST00000395253 831 ntBASIC20.3■□□□□ 0.84
SYNGAP1Q96PV0 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.3■□□□□ 0.84
SYNGAP1Q96PV0 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.3■□□□□ 0.84
SYNGAP1Q96PV0 AC098831.1-202ENST00000438821 336 ntBASIC20.3■□□□□ 0.84
SYNGAP1Q96PV0 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.3■□□□□ 0.84
SYNGAP1Q96PV0 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.3■□□□□ 0.84
SYNGAP1Q96PV0 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.3■□□□□ 0.84
SYNGAP1Q96PV0 AC012640.2-201ENST00000561606 901 ntBASIC20.3■□□□□ 0.84
SYNGAP1Q96PV0 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.3■□□□□ 0.84
SYNGAP1Q96PV0 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.3■□□□□ 0.84
SYNGAP1Q96PV0 AP000867.4-201ENST00000641616 219 ntBASIC20.3■□□□□ 0.84
SYNGAP1Q96PV0 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYNGAP1Q96PV0 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
SYNGAP1Q96PV0 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SYNGAP1Q96PV0 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYNGAP1Q96PV0 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYNGAP1Q96PV0 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYNGAP1Q96PV0 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYNGAP1Q96PV0 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.3■□□□□ 0.84
SYNGAP1Q96PV0 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.3■□□□□ 0.84
SYNGAP1Q96PV0 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.3■□□□□ 0.84
SYNGAP1Q96PV0 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYNGAP1Q96PV0 AC097374.2-201ENST00000618617 1306 ntBASIC20.3■□□□□ 0.84
SYNGAP1Q96PV0 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.3■□□□□ 0.84
SYNGAP1Q96PV0 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYNGAP1Q96PV0 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SYNGAP1Q96PV0 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SYNGAP1Q96PV0 AL591424.1-201ENST00000442569 1213 ntBASIC20.29■□□□□ 0.84
SYNGAP1Q96PV0 AC092910.1-201ENST00000482027 1129 ntBASIC20.29■□□□□ 0.84
SYNGAP1Q96PV0 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC20.29■□□□□ 0.84
SYNGAP1Q96PV0 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SYNGAP1Q96PV0 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.29■□□□□ 0.84
SYNGAP1Q96PV0 AC034105.1-201ENST00000563488 319 ntBASIC20.29■□□□□ 0.84
SYNGAP1Q96PV0 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.29■□□□□ 0.84
SYNGAP1Q96PV0 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.29■□□□□ 0.84
SYNGAP1Q96PV0 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SYNGAP1Q96PV0 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
SYNGAP1Q96PV0 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.29■□□□□ 0.84
SYNGAP1Q96PV0 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SYNGAP1Q96PV0 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SYNGAP1Q96PV0 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SYNGAP1Q96PV0 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.29■□□□□ 0.84
SYNGAP1Q96PV0 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SYNGAP1Q96PV0 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.29■□□□□ 0.84
SYNGAP1Q96PV0 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SYNGAP1Q96PV0 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SYNGAP1Q96PV0 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.29■□□□□ 0.84
SYNGAP1Q96PV0 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.29■□□□□ 0.84
SYNGAP1Q96PV0 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SYNGAP1Q96PV0 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SYNGAP1Q96PV0 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms