Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CCDC17Q96LX7 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC17Q96LX7 NKAPP1-205ENST00000585790 367 ntBASIC20.86■□□□□ 0.93
CCDC17Q96LX7 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.86■□□□□ 0.93
CCDC17Q96LX7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC17Q96LX7 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC17Q96LX7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC17Q96LX7 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.86■□□□□ 0.93
CCDC17Q96LX7 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC17Q96LX7 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC17Q96LX7 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC17Q96LX7 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC17Q96LX7 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC17Q96LX7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC17Q96LX7 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CCDC17Q96LX7 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC17Q96LX7 AC079776.2-201ENST00000641154 1609 ntBASIC20.86■□□□□ 0.93
CCDC17Q96LX7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
CCDC17Q96LX7 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC17Q96LX7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC17Q96LX7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC17Q96LX7 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC17Q96LX7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC17Q96LX7 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC17Q96LX7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC17Q96LX7 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC17Q96LX7 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC17Q96LX7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC17Q96LX7 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC17Q96LX7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC17Q96LX7 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.85■□□□□ 0.93
CCDC17Q96LX7 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC17Q96LX7 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC17Q96LX7 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC17Q96LX7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CCDC17Q96LX7 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.85■□□□□ 0.93
CCDC17Q96LX7 AC139887.3-201ENST00000568585 713 ntBASIC20.85■□□□□ 0.93
CCDC17Q96LX7 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.85■□□□□ 0.93
CCDC17Q96LX7 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC17Q96LX7 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC17Q96LX7 AC073592.4-201ENST00000623827 446 ntBASIC20.85■□□□□ 0.93
CCDC17Q96LX7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC17Q96LX7 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC17Q96LX7 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC17Q96LX7 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC17Q96LX7 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC17Q96LX7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC17Q96LX7 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC17Q96LX7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC17Q96LX7 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC17Q96LX7 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC17Q96LX7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC17Q96LX7 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC17Q96LX7 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.84■□□□□ 0.93
CCDC17Q96LX7 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC17Q96LX7 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC17Q96LX7 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.84■□□□□ 0.93
CCDC17Q96LX7 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.84■□□□□ 0.93
CCDC17Q96LX7 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC17Q96LX7 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC17Q96LX7 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC17Q96LX7 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.84■□□□□ 0.93
CCDC17Q96LX7 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC17Q96LX7 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC17Q96LX7 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.84■□□□□ 0.93
CCDC17Q96LX7 MIR7706-201ENST00000613747 67 ntBASIC20.84■□□□□ 0.93
CCDC17Q96LX7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.84■□□□□ 0.93
CCDC17Q96LX7 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC17Q96LX7 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CCDC17Q96LX7 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC17Q96LX7 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC17Q96LX7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
CCDC17Q96LX7 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC17Q96LX7 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC17Q96LX7 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC17Q96LX7 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC17Q96LX7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC17Q96LX7 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC17Q96LX7 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC17Q96LX7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CCDC17Q96LX7 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.83■□□□□ 0.93
CCDC17Q96LX7 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC17Q96LX7 DDX43P3-201ENST00000441064 443 ntBASIC20.83■□□□□ 0.93
CCDC17Q96LX7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.83■□□□□ 0.93
CCDC17Q96LX7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.83■□□□□ 0.93
CCDC17Q96LX7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
CCDC17Q96LX7 AL049840.3-201ENST00000602669 611 ntBASIC20.83■□□□□ 0.93
CCDC17Q96LX7 AC025062.2-201ENST00000605477 670 ntBASIC20.83■□□□□ 0.93
CCDC17Q96LX7 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
CCDC17Q96LX7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CCDC17Q96LX7 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.83■□□□□ 0.93
CCDC17Q96LX7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.83■□□□□ 0.92
CCDC17Q96LX7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.83■□□□□ 0.92
CCDC17Q96LX7 AC243591.1-201ENST00000452967 1364 ntBASIC20.83■□□□□ 0.92
CCDC17Q96LX7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC17Q96LX7 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC17Q96LX7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC17Q96LX7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC17Q96LX7 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC17Q96LX7 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms