Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
IFT43Q96FT9 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.5■□□□□ 0.55
IFT43Q96FT9 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
IFT43Q96FT9 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
IFT43Q96FT9 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.5■□□□□ 0.55
IFT43Q96FT9 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
IFT43Q96FT9 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.5■□□□□ 0.55
IFT43Q96FT9 AC093458.2-201ENST00000623150 629 ntBASIC18.5■□□□□ 0.55
IFT43Q96FT9 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
IFT43Q96FT9 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.5■□□□□ 0.55
IFT43Q96FT9 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IFT43Q96FT9 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IFT43Q96FT9 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IFT43Q96FT9 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IFT43Q96FT9 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
IFT43Q96FT9 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
IFT43Q96FT9 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
IFT43Q96FT9 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IFT43Q96FT9 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.5■□□□□ 0.55
IFT43Q96FT9 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.5■□□□□ 0.55
IFT43Q96FT9 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.5■□□□□ 0.55
IFT43Q96FT9 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
IFT43Q96FT9 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.5■□□□□ 0.55
IFT43Q96FT9 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
IFT43Q96FT9 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
IFT43Q96FT9 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IFT43Q96FT9 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
IFT43Q96FT9 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
IFT43Q96FT9 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
IFT43Q96FT9 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
IFT43Q96FT9 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
IFT43Q96FT9 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
IFT43Q96FT9 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
IFT43Q96FT9 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IFT43Q96FT9 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
IFT43Q96FT9 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.49■□□□□ 0.55
IFT43Q96FT9 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
IFT43Q96FT9 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
IFT43Q96FT9 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
IFT43Q96FT9 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IFT43Q96FT9 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IFT43Q96FT9 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
IFT43Q96FT9 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.49■□□□□ 0.55
IFT43Q96FT9 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.49■□□□□ 0.55
IFT43Q96FT9 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
IFT43Q96FT9 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.49■□□□□ 0.55
IFT43Q96FT9 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.49■□□□□ 0.55
IFT43Q96FT9 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
IFT43Q96FT9 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
IFT43Q96FT9 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
IFT43Q96FT9 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
IFT43Q96FT9 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IFT43Q96FT9 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.49■□□□□ 0.55
IFT43Q96FT9 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
IFT43Q96FT9 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IFT43Q96FT9 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
IFT43Q96FT9 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
IFT43Q96FT9 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IFT43Q96FT9 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.49■□□□□ 0.55
IFT43Q96FT9 ABALON-201ENST00000629058 1903 ntBASIC18.49■□□□□ 0.55
IFT43Q96FT9 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
IFT43Q96FT9 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.49■□□□□ 0.55
IFT43Q96FT9 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IFT43Q96FT9 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
IFT43Q96FT9 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
IFT43Q96FT9 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
IFT43Q96FT9 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
IFT43Q96FT9 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
IFT43Q96FT9 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
IFT43Q96FT9 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.48■□□□□ 0.55
IFT43Q96FT9 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.48■□□□□ 0.55
IFT43Q96FT9 ATP5G2P1-201ENST00000433580 426 ntBASIC18.48■□□□□ 0.55
IFT43Q96FT9 PVRIG2P-201ENST00000435460 978 ntBASIC18.48■□□□□ 0.55
IFT43Q96FT9 HCG4P8-203ENST00000443049 980 ntBASIC18.48■□□□□ 0.55
IFT43Q96FT9 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
IFT43Q96FT9 SPDYE13P-201ENST00000445314 798 ntBASIC18.48■□□□□ 0.55
IFT43Q96FT9 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.48■□□□□ 0.55
IFT43Q96FT9 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IFT43Q96FT9 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.48■□□□□ 0.55
IFT43Q96FT9 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.48■□□□□ 0.55
IFT43Q96FT9 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
IFT43Q96FT9 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IFT43Q96FT9 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
IFT43Q96FT9 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IFT43Q96FT9 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
IFT43Q96FT9 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IFT43Q96FT9 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
IFT43Q96FT9 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IFT43Q96FT9 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.48■□□□□ 0.55
IFT43Q96FT9 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.48■□□□□ 0.55
IFT43Q96FT9 AC093677.2-201ENST00000600169 1863 ntBASIC18.48■□□□□ 0.55
IFT43Q96FT9 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
IFT43Q96FT9 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IFT43Q96FT9 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.47■□□□□ 0.55
IFT43Q96FT9 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.47■□□□□ 0.55
IFT43Q96FT9 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.47■□□□□ 0.55
IFT43Q96FT9 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
IFT43Q96FT9 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
IFT43Q96FT9 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
IFT43Q96FT9 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms