Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIPA1Q96FS4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.95■□□□□ 0.46
SIPA1Q96FS4 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIPA1Q96FS4 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.95■□□□□ 0.46
SIPA1Q96FS4 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.95■□□□□ 0.46
SIPA1Q96FS4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIPA1Q96FS4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SIPA1Q96FS4 HLA-J-201ENST00000462773 1622 ntBASIC17.94■□□□□ 0.46
SIPA1Q96FS4 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIPA1Q96FS4 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SIPA1Q96FS4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIPA1Q96FS4 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIPA1Q96FS4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIPA1Q96FS4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIPA1Q96FS4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIPA1Q96FS4 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.94■□□□□ 0.46
SIPA1Q96FS4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SIPA1Q96FS4 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIPA1Q96FS4 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIPA1Q96FS4 KRT18P13-201ENST00000400056 1290 ntBASIC17.94■□□□□ 0.46
SIPA1Q96FS4 MIR940-201ENST00000401276 94 ntBASIC17.94■□□□□ 0.46
SIPA1Q96FS4 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.94■□□□□ 0.46
SIPA1Q96FS4 POLD2P1-201ENST00000511220 997 ntBASIC17.94■□□□□ 0.46
SIPA1Q96FS4 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.94■□□□□ 0.46
SIPA1Q96FS4 TERC-201ENST00000602385 541 ntBASIC17.94■□□□□ 0.46
SIPA1Q96FS4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.94■□□□□ 0.46
SIPA1Q96FS4 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.94■□□□□ 0.46
SIPA1Q96FS4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIPA1Q96FS4 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.94■□□□□ 0.46
SIPA1Q96FS4 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
SIPA1Q96FS4 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
SIPA1Q96FS4 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SIPA1Q96FS4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIPA1Q96FS4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIPA1Q96FS4 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.93■□□□□ 0.46
SIPA1Q96FS4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIPA1Q96FS4 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIPA1Q96FS4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SIPA1Q96FS4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SIPA1Q96FS4 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SIPA1Q96FS4 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SIPA1Q96FS4 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIPA1Q96FS4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.93■□□□□ 0.46
SIPA1Q96FS4 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIPA1Q96FS4 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
SIPA1Q96FS4 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIPA1Q96FS4 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SIPA1Q96FS4 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SIPA1Q96FS4 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIPA1Q96FS4 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SIPA1Q96FS4 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIPA1Q96FS4 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.93■□□□□ 0.46
SIPA1Q96FS4 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.93■□□□□ 0.46
SIPA1Q96FS4 NKAPP1-205ENST00000585790 367 ntBASIC17.93■□□□□ 0.46
SIPA1Q96FS4 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.93■□□□□ 0.46
SIPA1Q96FS4 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.93■□□□□ 0.46
SIPA1Q96FS4 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.93■□□□□ 0.46
SIPA1Q96FS4 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIPA1Q96FS4 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SIPA1Q96FS4 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SIPA1Q96FS4 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SIPA1Q96FS4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SIPA1Q96FS4 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SIPA1Q96FS4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIPA1Q96FS4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIPA1Q96FS4 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIPA1Q96FS4 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.93■□□□□ 0.46
SIPA1Q96FS4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.93■□□□□ 0.46
SIPA1Q96FS4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
SIPA1Q96FS4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SIPA1Q96FS4 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SIPA1Q96FS4 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SIPA1Q96FS4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.92■□□□□ 0.46
SIPA1Q96FS4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
SIPA1Q96FS4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIPA1Q96FS4 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIPA1Q96FS4 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIPA1Q96FS4 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SIPA1Q96FS4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIPA1Q96FS4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SIPA1Q96FS4 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIPA1Q96FS4 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SIPA1Q96FS4 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SIPA1Q96FS4 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SIPA1Q96FS4 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.92■□□□□ 0.46
SIPA1Q96FS4 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.92■□□□□ 0.46
SIPA1Q96FS4 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIPA1Q96FS4 AC025062.2-201ENST00000605477 670 ntBASIC17.92■□□□□ 0.46
SIPA1Q96FS4 AP000867.4-201ENST00000641616 219 ntBASIC17.92■□□□□ 0.46
SIPA1Q96FS4 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIPA1Q96FS4 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIPA1Q96FS4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SIPA1Q96FS4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.92■□□□□ 0.46
SIPA1Q96FS4 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIPA1Q96FS4 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.92■□□□□ 0.46
SIPA1Q96FS4 PMS2P7-201ENST00000506558 1336 ntBASIC17.92■□□□□ 0.46
SIPA1Q96FS4 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIPA1Q96FS4 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIPA1Q96FS4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIPA1Q96FS4 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms