Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.82■□□□□ 0.44
CLDN23Q96B33 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.82■□□□□ 0.44
CLDN23Q96B33 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.82■□□□□ 0.44
CLDN23Q96B33 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CLDN23Q96B33 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CLDN23Q96B33 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.82■□□□□ 0.44
CLDN23Q96B33 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.82■□□□□ 0.44
CLDN23Q96B33 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.82■□□□□ 0.44
CLDN23Q96B33 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.82■□□□□ 0.44
CLDN23Q96B33 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN23Q96B33 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN23Q96B33 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN23Q96B33 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN23Q96B33 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.82■□□□□ 0.44
CLDN23Q96B33 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN23Q96B33 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.81■□□□□ 0.44
CLDN23Q96B33 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN23Q96B33 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.81■□□□□ 0.44
CLDN23Q96B33 BCAR1-209ENST00000546196 1340 ntBASIC17.81■□□□□ 0.44
CLDN23Q96B33 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN23Q96B33 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN23Q96B33 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.81■□□□□ 0.44
CLDN23Q96B33 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN23Q96B33 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN23Q96B33 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN23Q96B33 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.81■□□□□ 0.44
CLDN23Q96B33 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.81■□□□□ 0.44
CLDN23Q96B33 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.81■□□□□ 0.44
CLDN23Q96B33 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN23Q96B33 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.81■□□□□ 0.44
CLDN23Q96B33 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.81■□□□□ 0.44
CLDN23Q96B33 AL513210.1-201ENST00000629608 234 ntBASIC17.81■□□□□ 0.44
CLDN23Q96B33 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN23Q96B33 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
CLDN23Q96B33 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
CLDN23Q96B33 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN23Q96B33 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN23Q96B33 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN23Q96B33 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN23Q96B33 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.81■□□□□ 0.44
CLDN23Q96B33 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CLDN23Q96B33 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN23Q96B33 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN23Q96B33 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
CLDN23Q96B33 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN23Q96B33 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN23Q96B33 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN23Q96B33 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN23Q96B33 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN23Q96B33 AC003669.1-201ENST00000334569 611 ntBASIC17.8■□□□□ 0.44
CLDN23Q96B33 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN23Q96B33 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.8■□□□□ 0.44
CLDN23Q96B33 FAM58CP-201ENST00000435741 640 ntBASIC17.8■□□□□ 0.44
CLDN23Q96B33 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.8■□□□□ 0.44
CLDN23Q96B33 AC244107.1-201ENST00000442033 332 ntBASIC17.8■□□□□ 0.44
CLDN23Q96B33 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN23Q96B33 AC074386.1-202ENST00000463561 864 ntBASIC17.8■□□□□ 0.44
CLDN23Q96B33 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN23Q96B33 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.8■□□□□ 0.44
CLDN23Q96B33 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN23Q96B33 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.8■□□□□ 0.44
CLDN23Q96B33 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CLDN23Q96B33 SIRPAP1-201ENST00000448467 1770 ntBASIC17.8■□□□□ 0.44
CLDN23Q96B33 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CLDN23Q96B33 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CLDN23Q96B33 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN23Q96B33 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN23Q96B33 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN23Q96B33 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN23Q96B33 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CLDN23Q96B33 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.8■□□□□ 0.44
CLDN23Q96B33 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN23Q96B33 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN23Q96B33 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN23Q96B33 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CLDN23Q96B33 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN23Q96B33 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDN23Q96B33 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.79■□□□□ 0.44
CLDN23Q96B33 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN23Q96B33 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN23Q96B33 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.79■□□□□ 0.44
CLDN23Q96B33 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN23Q96B33 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN23Q96B33 HLA-J-203ENST00000494367 1087 ntBASIC17.79■□□□□ 0.44
CLDN23Q96B33 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.79■□□□□ 0.44
CLDN23Q96B33 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.79■□□□□ 0.44
CLDN23Q96B33 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.79■□□□□ 0.44
CLDN23Q96B33 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.79■□□□□ 0.44
CLDN23Q96B33 OR7E47P-204ENST00000575924 449 ntBASIC17.79■□□□□ 0.44
CLDN23Q96B33 AC004835.2-201ENST00000603762 682 ntBASIC17.79■□□□□ 0.44
CLDN23Q96B33 GGTLC5P-201ENST00000617623 998 ntBASIC17.79■□□□□ 0.44
CLDN23Q96B33 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN23Q96B33 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.79■□□□□ 0.44
CLDN23Q96B33 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN23Q96B33 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CLDN23Q96B33 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN23Q96B33 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN23Q96B33 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN23Q96B33 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.79■□□□□ 0.44
CLDN23Q96B33 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms