Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.15
MBD3L1Q8WWY6 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
MBD3L1Q8WWY6 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
MBD3L1Q8WWY6 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
MBD3L1Q8WWY6 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MBD3L1Q8WWY6 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MBD3L1Q8WWY6 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
MBD3L1Q8WWY6 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
MBD3L1Q8WWY6 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
MBD3L1Q8WWY6 METTL26-203ENST00000397664 604 ntTSL 2 BASIC14.08□□□□□ -0.16
MBD3L1Q8WWY6 DERL1-203ENST00000419562 918 ntTSL 2 BASIC14.08□□□□□ -0.16
MBD3L1Q8WWY6 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC14.08□□□□□ -0.16
MBD3L1Q8WWY6 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC14.08□□□□□ -0.16
MBD3L1Q8WWY6 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC14.08□□□□□ -0.16
MBD3L1Q8WWY6 AC004264.1-201ENST00000608354 794 ntBASIC14.08□□□□□ -0.16
MBD3L1Q8WWY6 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MBD3L1Q8WWY6 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
MBD3L1Q8WWY6 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MBD3L1Q8WWY6 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MBD3L1Q8WWY6 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
MBD3L1Q8WWY6 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
MBD3L1Q8WWY6 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
MBD3L1Q8WWY6 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
MBD3L1Q8WWY6 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.08□□□□□ -0.16
MBD3L1Q8WWY6 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MBD3L1Q8WWY6 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MBD3L1Q8WWY6 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 AC060834.1-201ENST00000443027 2032 ntBASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 PCDHB17P-201ENST00000539533 2393 ntBASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MBD3L1Q8WWY6 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
MBD3L1Q8WWY6 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
MBD3L1Q8WWY6 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
MBD3L1Q8WWY6 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MBD3L1Q8WWY6 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.06□□□□□ -0.16
MBD3L1Q8WWY6 NBPF21P-201ENST00000425093 1451 ntBASIC14.06□□□□□ -0.16
MBD3L1Q8WWY6 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MBD3L1Q8WWY6 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
MBD3L1Q8WWY6 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MBD3L1Q8WWY6 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
MBD3L1Q8WWY6 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MBD3L1Q8WWY6 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MBD3L1Q8WWY6 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
MBD3L1Q8WWY6 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.06□□□□□ -0.16
MBD3L1Q8WWY6 LINC02199-201ENST00000506655 2702 ntBASIC14.06□□□□□ -0.16
MBD3L1Q8WWY6 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MBD3L1Q8WWY6 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
MBD3L1Q8WWY6 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
MBD3L1Q8WWY6 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC14.06□□□□□ -0.16
MBD3L1Q8WWY6 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC14.06□□□□□ -0.16
MBD3L1Q8WWY6 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC14.06□□□□□ -0.16
MBD3L1Q8WWY6 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC14.06□□□□□ -0.16
MBD3L1Q8WWY6 OR2A1-AS1-207ENST00000486094 819 ntBASIC14.06□□□□□ -0.16
MBD3L1Q8WWY6 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms