Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CKAP2Q8WWK9 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.83■□□□□ 0.45
CKAP2Q8WWK9 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.83■□□□□ 0.45
CKAP2Q8WWK9 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.83■□□□□ 0.45
CKAP2Q8WWK9 AC060834.1-201ENST00000443027 2032 ntBASIC17.83■□□□□ 0.45
CKAP2Q8WWK9 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CKAP2Q8WWK9 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.83■□□□□ 0.44
CKAP2Q8WWK9 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CKAP2Q8WWK9 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CKAP2Q8WWK9 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.83■□□□□ 0.44
CKAP2Q8WWK9 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CKAP2Q8WWK9 KRASP1-201ENST00000407852 552 ntBASIC17.83■□□□□ 0.44
CKAP2Q8WWK9 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.83■□□□□ 0.44
CKAP2Q8WWK9 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CKAP2Q8WWK9 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.83■□□□□ 0.44
CKAP2Q8WWK9 LINC01451-201ENST00000623792 534 ntBASIC17.83■□□□□ 0.44
CKAP2Q8WWK9 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CKAP2Q8WWK9 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.83■□□□□ 0.44
CKAP2Q8WWK9 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
CKAP2Q8WWK9 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CKAP2Q8WWK9 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CKAP2Q8WWK9 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CKAP2Q8WWK9 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
CKAP2Q8WWK9 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CKAP2Q8WWK9 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CKAP2Q8WWK9 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CKAP2Q8WWK9 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.83■□□□□ 0.44
CKAP2Q8WWK9 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CKAP2Q8WWK9 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.83■□□□□ 0.44
CKAP2Q8WWK9 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CKAP2Q8WWK9 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.82■□□□□ 0.44
CKAP2Q8WWK9 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CKAP2Q8WWK9 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CKAP2Q8WWK9 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CKAP2Q8WWK9 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CKAP2Q8WWK9 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CKAP2Q8WWK9 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CKAP2Q8WWK9 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CKAP2Q8WWK9 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CKAP2Q8WWK9 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.82■□□□□ 0.44
CKAP2Q8WWK9 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.82■□□□□ 0.44
CKAP2Q8WWK9 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CKAP2Q8WWK9 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.82■□□□□ 0.44
CKAP2Q8WWK9 KSR1P1-201ENST00000446298 240 ntBASIC17.82■□□□□ 0.44
CKAP2Q8WWK9 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CKAP2Q8WWK9 UNC93B5-201ENST00000530315 699 ntBASIC17.82■□□□□ 0.44
CKAP2Q8WWK9 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.82■□□□□ 0.44
CKAP2Q8WWK9 MIR3180-5-201ENST00000583743 153 ntBASIC17.82■□□□□ 0.44
CKAP2Q8WWK9 AL353708.3-201ENST00000610272 989 ntBASIC17.82■□□□□ 0.44
CKAP2Q8WWK9 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CKAP2Q8WWK9 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
CKAP2Q8WWK9 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.82■□□□□ 0.44
CKAP2Q8WWK9 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.82■□□□□ 0.44
CKAP2Q8WWK9 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CKAP2Q8WWK9 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.82■□□□□ 0.44
CKAP2Q8WWK9 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CKAP2Q8WWK9 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CKAP2Q8WWK9 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CKAP2Q8WWK9 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.81■□□□□ 0.44
CKAP2Q8WWK9 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CKAP2Q8WWK9 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CKAP2Q8WWK9 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.81■□□□□ 0.44
CKAP2Q8WWK9 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CKAP2Q8WWK9 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CKAP2Q8WWK9 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.81■□□□□ 0.44
CKAP2Q8WWK9 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CKAP2Q8WWK9 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CKAP2Q8WWK9 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.81■□□□□ 0.44
CKAP2Q8WWK9 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CKAP2Q8WWK9 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CKAP2Q8WWK9 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CKAP2Q8WWK9 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CKAP2Q8WWK9 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.81■□□□□ 0.44
CKAP2Q8WWK9 AL138781.1-201ENST00000566567 1274 ntBASIC17.81■□□□□ 0.44
CKAP2Q8WWK9 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CKAP2Q8WWK9 AC069544.1-201ENST00000609399 999 ntBASIC17.81■□□□□ 0.44
CKAP2Q8WWK9 AL023875.1-201ENST00000640777 796 ntBASIC17.81■□□□□ 0.44
CKAP2Q8WWK9 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CKAP2Q8WWK9 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CKAP2Q8WWK9 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.81■□□□□ 0.44
CKAP2Q8WWK9 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CKAP2Q8WWK9 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CKAP2Q8WWK9 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CKAP2Q8WWK9 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.81■□□□□ 0.44
CKAP2Q8WWK9 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CKAP2Q8WWK9 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CKAP2Q8WWK9 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CKAP2Q8WWK9 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CKAP2Q8WWK9 REXO1L11P-201ENST00000620964 1927 ntBASIC17.8■□□□□ 0.44
CKAP2Q8WWK9 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.8■□□□□ 0.44
CKAP2Q8WWK9 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.8■□□□□ 0.44
CKAP2Q8WWK9 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.8■□□□□ 0.44
CKAP2Q8WWK9 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.8■□□□□ 0.44
CKAP2Q8WWK9 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
CKAP2Q8WWK9 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CKAP2Q8WWK9 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CKAP2Q8WWK9 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CKAP2Q8WWK9 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CKAP2Q8WWK9 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CKAP2Q8WWK9 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms