Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
HMGB4Q8WW32 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGB4Q8WW32 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGB4Q8WW32 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGB4Q8WW32 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.94■□□□□ 0.46
HMGB4Q8WW32 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.94■□□□□ 0.46
HMGB4Q8WW32 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGB4Q8WW32 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HMGB4Q8WW32 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGB4Q8WW32 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
HMGB4Q8WW32 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGB4Q8WW32 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGB4Q8WW32 ESPNP-201ENST00000270691 2015 ntBASIC17.94■□□□□ 0.46
HMGB4Q8WW32 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HMGB4Q8WW32 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGB4Q8WW32 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
HMGB4Q8WW32 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGB4Q8WW32 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGB4Q8WW32 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HMGB4Q8WW32 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
HMGB4Q8WW32 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.93■□□□□ 0.46
HMGB4Q8WW32 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
HMGB4Q8WW32 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.93■□□□□ 0.46
HMGB4Q8WW32 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HMGB4Q8WW32 AL020996.1-203ENST00000536896 2307 ntBASIC17.93■□□□□ 0.46
HMGB4Q8WW32 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGB4Q8WW32 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.93■□□□□ 0.46
HMGB4Q8WW32 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.93■□□□□ 0.46
HMGB4Q8WW32 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGB4Q8WW32 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGB4Q8WW32 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGB4Q8WW32 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGB4Q8WW32 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGB4Q8WW32 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.93■□□□□ 0.46
HMGB4Q8WW32 LAGE3P1-201ENST00000425356 484 ntBASIC17.93■□□□□ 0.46
HMGB4Q8WW32 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.93■□□□□ 0.46
HMGB4Q8WW32 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.93■□□□□ 0.46
HMGB4Q8WW32 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.93■□□□□ 0.46
HMGB4Q8WW32 UNC93B6-202ENST00000528242 690 ntBASIC17.93■□□□□ 0.46
HMGB4Q8WW32 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.93■□□□□ 0.46
HMGB4Q8WW32 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.93■□□□□ 0.46
HMGB4Q8WW32 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HMGB4Q8WW32 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
HMGB4Q8WW32 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
HMGB4Q8WW32 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.93■□□□□ 0.46
HMGB4Q8WW32 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGB4Q8WW32 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGB4Q8WW32 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HMGB4Q8WW32 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
HMGB4Q8WW32 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HMGB4Q8WW32 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGB4Q8WW32 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HMGB4Q8WW32 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
HMGB4Q8WW32 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGB4Q8WW32 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGB4Q8WW32 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.92■□□□□ 0.46
HMGB4Q8WW32 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HMGB4Q8WW32 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGB4Q8WW32 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
HMGB4Q8WW32 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGB4Q8WW32 AC007967.2-201ENST00000432613 625 ntBASIC17.92■□□□□ 0.46
HMGB4Q8WW32 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.92■□□□□ 0.46
HMGB4Q8WW32 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.92■□□□□ 0.46
HMGB4Q8WW32 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.92■□□□□ 0.46
HMGB4Q8WW32 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.92■□□□□ 0.46
HMGB4Q8WW32 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
HMGB4Q8WW32 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
HMGB4Q8WW32 AC055717.3-201ENST00000622967 595 ntBASIC17.92■□□□□ 0.46
HMGB4Q8WW32 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.92■□□□□ 0.46
HMGB4Q8WW32 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
HMGB4Q8WW32 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGB4Q8WW32 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.92■□□□□ 0.46
HMGB4Q8WW32 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HMGB4Q8WW32 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.92■□□□□ 0.46
HMGB4Q8WW32 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.91■□□□□ 0.46
HMGB4Q8WW32 BCL2-203ENST00000589955 5011 ntBASIC17.91■□□□□ 0.46
HMGB4Q8WW32 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HMGB4Q8WW32 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
HMGB4Q8WW32 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.91■□□□□ 0.46
HMGB4Q8WW32 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGB4Q8WW32 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGB4Q8WW32 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGB4Q8WW32 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HMGB4Q8WW32 UPF3AP3-201ENST00000420996 769 ntBASIC17.91■□□□□ 0.46
HMGB4Q8WW32 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.91■□□□□ 0.46
HMGB4Q8WW32 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.91■□□□□ 0.46
HMGB4Q8WW32 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HMGB4Q8WW32 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.91■□□□□ 0.46
HMGB4Q8WW32 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HMGB4Q8WW32 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.91■□□□□ 0.46
HMGB4Q8WW32 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGB4Q8WW32 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGB4Q8WW32 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
HMGB4Q8WW32 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGB4Q8WW32 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGB4Q8WW32 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HMGB4Q8WW32 AC097374.2-201ENST00000618617 1306 ntBASIC17.91■□□□□ 0.46
HMGB4Q8WW32 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.91■□□□□ 0.46
HMGB4Q8WW32 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.91■□□□□ 0.46
HMGB4Q8WW32 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms