Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CT55Q8WUE5 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CT55Q8WUE5 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CT55Q8WUE5 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CT55Q8WUE5 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CT55Q8WUE5 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CT55Q8WUE5 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
CT55Q8WUE5 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CT55Q8WUE5 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CT55Q8WUE5 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CT55Q8WUE5 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.64■□□□□ 0.26
CT55Q8WUE5 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
CT55Q8WUE5 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.64■□□□□ 0.25
CT55Q8WUE5 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CT55Q8WUE5 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CT55Q8WUE5 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CT55Q8WUE5 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CT55Q8WUE5 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.64■□□□□ 0.25
CT55Q8WUE5 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CT55Q8WUE5 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CT55Q8WUE5 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
CT55Q8WUE5 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CT55Q8WUE5 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.64■□□□□ 0.25
CT55Q8WUE5 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.64■□□□□ 0.25
CT55Q8WUE5 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.64■□□□□ 0.25
CT55Q8WUE5 AL591424.1-201ENST00000442569 1213 ntBASIC16.64■□□□□ 0.25
CT55Q8WUE5 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.64■□□□□ 0.25
CT55Q8WUE5 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
CT55Q8WUE5 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.64■□□□□ 0.25
CT55Q8WUE5 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.64■□□□□ 0.25
CT55Q8WUE5 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CT55Q8WUE5 AC073592.4-201ENST00000623827 446 ntBASIC16.64■□□□□ 0.25
CT55Q8WUE5 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.64■□□□□ 0.25
CT55Q8WUE5 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CT55Q8WUE5 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CT55Q8WUE5 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.64■□□□□ 0.25
CT55Q8WUE5 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.64■□□□□ 0.25
CT55Q8WUE5 AC004817.3-201ENST00000602957 2129 ntBASIC16.64■□□□□ 0.25
CT55Q8WUE5 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.64■□□□□ 0.25
CT55Q8WUE5 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.64■□□□□ 0.25
CT55Q8WUE5 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.64■□□□□ 0.25
CT55Q8WUE5 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.64■□□□□ 0.25
CT55Q8WUE5 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CT55Q8WUE5 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CT55Q8WUE5 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
CT55Q8WUE5 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CT55Q8WUE5 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CT55Q8WUE5 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CT55Q8WUE5 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CT55Q8WUE5 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CT55Q8WUE5 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CT55Q8WUE5 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CT55Q8WUE5 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CT55Q8WUE5 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CT55Q8WUE5 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CT55Q8WUE5 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CT55Q8WUE5 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CT55Q8WUE5 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CT55Q8WUE5 COX5BP2-201ENST00000392354 334 ntBASIC16.63■□□□□ 0.25
CT55Q8WUE5 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CT55Q8WUE5 SPDYE21P-201ENST00000413323 827 ntBASIC16.63■□□□□ 0.25
CT55Q8WUE5 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.63■□□□□ 0.25
CT55Q8WUE5 AC103564.2-201ENST00000432853 1299 ntBASIC16.63■□□□□ 0.25
CT55Q8WUE5 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.63■□□□□ 0.25
CT55Q8WUE5 KRT18P3-201ENST00000451602 1288 ntBASIC16.63■□□□□ 0.25
CT55Q8WUE5 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.63■□□□□ 0.25
CT55Q8WUE5 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.63■□□□□ 0.25
CT55Q8WUE5 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.63■□□□□ 0.25
CT55Q8WUE5 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CT55Q8WUE5 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.63■□□□□ 0.25
CT55Q8WUE5 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.63■□□□□ 0.25
CT55Q8WUE5 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.63■□□□□ 0.25
CT55Q8WUE5 AC073592.5-201ENST00000624854 528 ntBASIC16.63■□□□□ 0.25
CT55Q8WUE5 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CT55Q8WUE5 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CT55Q8WUE5 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.63■□□□□ 0.25
CT55Q8WUE5 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
CT55Q8WUE5 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CT55Q8WUE5 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CT55Q8WUE5 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CT55Q8WUE5 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CT55Q8WUE5 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.63■□□□□ 0.25
CT55Q8WUE5 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CT55Q8WUE5 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CT55Q8WUE5 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.62■□□□□ 0.25
CT55Q8WUE5 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
CT55Q8WUE5 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.62■□□□□ 0.25
CT55Q8WUE5 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CT55Q8WUE5 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CT55Q8WUE5 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CT55Q8WUE5 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CT55Q8WUE5 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CT55Q8WUE5 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
CT55Q8WUE5 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CT55Q8WUE5 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CT55Q8WUE5 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CT55Q8WUE5 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
CT55Q8WUE5 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.62■□□□□ 0.25
CT55Q8WUE5 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CT55Q8WUE5 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms