Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRAF3IP1Q8TDR0 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAF3IP1Q8TDR0 KRT18P55-202ENST00000578578 1546 ntBASIC18.73■□□□□ 0.59
TRAF3IP1Q8TDR0 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TRAF3IP1Q8TDR0 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TRAF3IP1Q8TDR0 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRAF3IP1Q8TDR0 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAF3IP1Q8TDR0 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAF3IP1Q8TDR0 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
TRAF3IP1Q8TDR0 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.72■□□□□ 0.59
TRAF3IP1Q8TDR0 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.72■□□□□ 0.59
TRAF3IP1Q8TDR0 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAF3IP1Q8TDR0 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAF3IP1Q8TDR0 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAF3IP1Q8TDR0 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.72■□□□□ 0.59
TRAF3IP1Q8TDR0 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAF3IP1Q8TDR0 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAF3IP1Q8TDR0 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.72■□□□□ 0.59
TRAF3IP1Q8TDR0 RASA4DP-201ENST00000460726 1199 ntBASIC18.72■□□□□ 0.59
TRAF3IP1Q8TDR0 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
TRAF3IP1Q8TDR0 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.72■□□□□ 0.59
TRAF3IP1Q8TDR0 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TRAF3IP1Q8TDR0 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.72■□□□□ 0.59
TRAF3IP1Q8TDR0 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TRAF3IP1Q8TDR0 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAF3IP1Q8TDR0 AC097493.4-201ENST00000641197 219 ntBASIC18.72■□□□□ 0.59
TRAF3IP1Q8TDR0 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
TRAF3IP1Q8TDR0 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TRAF3IP1Q8TDR0 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAF3IP1Q8TDR0 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAF3IP1Q8TDR0 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.72■□□□□ 0.59
TRAF3IP1Q8TDR0 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TRAF3IP1Q8TDR0 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAF3IP1Q8TDR0 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAF3IP1Q8TDR0 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRAF3IP1Q8TDR0 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.72■□□□□ 0.59
TRAF3IP1Q8TDR0 AC022898.2-201ENST00000616822 1312 ntBASIC18.72■□□□□ 0.59
TRAF3IP1Q8TDR0 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAF3IP1Q8TDR0 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRAF3IP1Q8TDR0 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
TRAF3IP1Q8TDR0 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TRAF3IP1Q8TDR0 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAF3IP1Q8TDR0 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAF3IP1Q8TDR0 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAF3IP1Q8TDR0 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRAF3IP1Q8TDR0 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRAF3IP1Q8TDR0 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAF3IP1Q8TDR0 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TRAF3IP1Q8TDR0 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.71■□□□□ 0.59
TRAF3IP1Q8TDR0 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TRAF3IP1Q8TDR0 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAF3IP1Q8TDR0 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
TRAF3IP1Q8TDR0 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAF3IP1Q8TDR0 BX664615.1-201ENST00000443558 458 ntBASIC18.71■□□□□ 0.59
TRAF3IP1Q8TDR0 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.71■□□□□ 0.59
TRAF3IP1Q8TDR0 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.71■□□□□ 0.59
TRAF3IP1Q8TDR0 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAF3IP1Q8TDR0 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.71■□□□□ 0.59
TRAF3IP1Q8TDR0 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAF3IP1Q8TDR0 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
TRAF3IP1Q8TDR0 AC012317.2-201ENST00000623305 2251 ntBASIC18.71■□□□□ 0.59
TRAF3IP1Q8TDR0 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.71■□□□□ 0.59
TRAF3IP1Q8TDR0 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRAF3IP1Q8TDR0 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAF3IP1Q8TDR0 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRAF3IP1Q8TDR0 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TRAF3IP1Q8TDR0 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TRAF3IP1Q8TDR0 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
TRAF3IP1Q8TDR0 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TRAF3IP1Q8TDR0 AC132938.6-201ENST00000623828 1655 ntBASIC18.7■□□□□ 0.58
TRAF3IP1Q8TDR0 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAF3IP1Q8TDR0 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.7■□□□□ 0.58
TRAF3IP1Q8TDR0 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.7■□□□□ 0.58
TRAF3IP1Q8TDR0 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAF3IP1Q8TDR0 TERF1P1-201ENST00000311003 1181 ntBASIC18.7■□□□□ 0.58
TRAF3IP1Q8TDR0 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAF3IP1Q8TDR0 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.7■□□□□ 0.58
TRAF3IP1Q8TDR0 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TRAF3IP1Q8TDR0 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRAF3IP1Q8TDR0 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRAF3IP1Q8TDR0 DUTP2-201ENST00000519164 463 ntBASIC18.7■□□□□ 0.58
TRAF3IP1Q8TDR0 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.7■□□□□ 0.58
TRAF3IP1Q8TDR0 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.7■□□□□ 0.58
TRAF3IP1Q8TDR0 AL441883.1-201ENST00000566170 1045 ntBASIC18.7■□□□□ 0.58
TRAF3IP1Q8TDR0 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
TRAF3IP1Q8TDR0 AC012306.2-201ENST00000609350 630 ntBASIC18.7■□□□□ 0.58
TRAF3IP1Q8TDR0 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.7■□□□□ 0.58
TRAF3IP1Q8TDR0 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAF3IP1Q8TDR0 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.7■□□□□ 0.58
TRAF3IP1Q8TDR0 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAF3IP1Q8TDR0 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.7■□□□□ 0.58
TRAF3IP1Q8TDR0 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.7■□□□□ 0.58
TRAF3IP1Q8TDR0 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAF3IP1Q8TDR0 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.7■□□□□ 0.58
TRAF3IP1Q8TDR0 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAF3IP1Q8TDR0 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.69■□□□□ 0.58
TRAF3IP1Q8TDR0 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.69■□□□□ 0.58
TRAF3IP1Q8TDR0 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAF3IP1Q8TDR0 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAF3IP1Q8TDR0 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms