Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB3IL1Q8TBN0 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB3IL1Q8TBN0 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.91■□□□□ 0.46
RAB3IL1Q8TBN0 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB3IL1Q8TBN0 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.91■□□□□ 0.46
RAB3IL1Q8TBN0 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB3IL1Q8TBN0 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB3IL1Q8TBN0 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.91■□□□□ 0.46
RAB3IL1Q8TBN0 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RAB3IL1Q8TBN0 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.91■□□□□ 0.46
RAB3IL1Q8TBN0 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.91■□□□□ 0.46
RAB3IL1Q8TBN0 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB3IL1Q8TBN0 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB3IL1Q8TBN0 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAB3IL1Q8TBN0 AC084018.2-201ENST00000613093 2607 ntBASIC17.9■□□□□ 0.46
RAB3IL1Q8TBN0 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RAB3IL1Q8TBN0 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
RAB3IL1Q8TBN0 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB3IL1Q8TBN0 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB3IL1Q8TBN0 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.9■□□□□ 0.46
RAB3IL1Q8TBN0 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB3IL1Q8TBN0 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.9■□□□□ 0.46
RAB3IL1Q8TBN0 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB3IL1Q8TBN0 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB3IL1Q8TBN0 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RAB3IL1Q8TBN0 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
RAB3IL1Q8TBN0 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.9■□□□□ 0.46
RAB3IL1Q8TBN0 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.9■□□□□ 0.46
RAB3IL1Q8TBN0 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.9■□□□□ 0.46
RAB3IL1Q8TBN0 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAB3IL1Q8TBN0 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.9■□□□□ 0.46
RAB3IL1Q8TBN0 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB3IL1Q8TBN0 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAB3IL1Q8TBN0 AC036111.1-201ENST00000533973 1582 ntBASIC17.9■□□□□ 0.46
RAB3IL1Q8TBN0 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB3IL1Q8TBN0 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.9■□□□□ 0.46
RAB3IL1Q8TBN0 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB3IL1Q8TBN0 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.9■□□□□ 0.46
RAB3IL1Q8TBN0 AL355312.1-201ENST00000407115 2176 ntBASIC17.9■□□□□ 0.46
RAB3IL1Q8TBN0 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB3IL1Q8TBN0 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
RAB3IL1Q8TBN0 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB3IL1Q8TBN0 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RAB3IL1Q8TBN0 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
RAB3IL1Q8TBN0 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
RAB3IL1Q8TBN0 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAB3IL1Q8TBN0 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB3IL1Q8TBN0 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB3IL1Q8TBN0 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB3IL1Q8TBN0 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.89■□□□□ 0.45
RAB3IL1Q8TBN0 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB3IL1Q8TBN0 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.89■□□□□ 0.45
RAB3IL1Q8TBN0 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
RAB3IL1Q8TBN0 KRT18P29-201ENST00000397031 1267 ntBASIC17.89■□□□□ 0.45
RAB3IL1Q8TBN0 DUTP2-201ENST00000519164 463 ntBASIC17.89■□□□□ 0.45
RAB3IL1Q8TBN0 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.89■□□□□ 0.45
RAB3IL1Q8TBN0 MIR3180-5-201ENST00000583743 153 ntBASIC17.89■□□□□ 0.45
RAB3IL1Q8TBN0 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB3IL1Q8TBN0 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.89■□□□□ 0.45
RAB3IL1Q8TBN0 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAB3IL1Q8TBN0 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.89■□□□□ 0.45
RAB3IL1Q8TBN0 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.89■□□□□ 0.45
RAB3IL1Q8TBN0 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.89■□□□□ 0.45
RAB3IL1Q8TBN0 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB3IL1Q8TBN0 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB3IL1Q8TBN0 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAB3IL1Q8TBN0 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.89■□□□□ 0.45
RAB3IL1Q8TBN0 HOXB1-202ENST00000577092 1414 ntBASIC17.89■□□□□ 0.45
RAB3IL1Q8TBN0 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB3IL1Q8TBN0 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB3IL1Q8TBN0 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB3IL1Q8TBN0 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.88■□□□□ 0.45
RAB3IL1Q8TBN0 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RAB3IL1Q8TBN0 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB3IL1Q8TBN0 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB3IL1Q8TBN0 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RAB3IL1Q8TBN0 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB3IL1Q8TBN0 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.88■□□□□ 0.45
RAB3IL1Q8TBN0 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB3IL1Q8TBN0 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RAB3IL1Q8TBN0 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
RAB3IL1Q8TBN0 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB3IL1Q8TBN0 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RAB3IL1Q8TBN0 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RAB3IL1Q8TBN0 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
RAB3IL1Q8TBN0 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB3IL1Q8TBN0 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
RAB3IL1Q8TBN0 ITM2C-210ENST00000620962 501 ntBASIC17.88■□□□□ 0.45
RAB3IL1Q8TBN0 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.88■□□□□ 0.45
RAB3IL1Q8TBN0 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.88■□□□□ 0.45
RAB3IL1Q8TBN0 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
RAB3IL1Q8TBN0 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RAB3IL1Q8TBN0 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB3IL1Q8TBN0 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RAB3IL1Q8TBN0 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RAB3IL1Q8TBN0 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.88■□□□□ 0.45
RAB3IL1Q8TBN0 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.88■□□□□ 0.45
RAB3IL1Q8TBN0 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB3IL1Q8TBN0 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB3IL1Q8TBN0 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms