Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFWD2Q8NHY2 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.76■□□□□ 0.43
RFWD2Q8NHY2 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.76■□□□□ 0.43
RFWD2Q8NHY2 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RFWD2Q8NHY2 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.76■□□□□ 0.43
RFWD2Q8NHY2 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RFWD2Q8NHY2 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFWD2Q8NHY2 AC106886.4-201ENST00000623557 2502 ntBASIC17.76■□□□□ 0.43
RFWD2Q8NHY2 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFWD2Q8NHY2 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RFWD2Q8NHY2 GPAT2P1-201ENST00000444924 1672 ntBASIC17.76■□□□□ 0.43
RFWD2Q8NHY2 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFWD2Q8NHY2 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
RFWD2Q8NHY2 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFWD2Q8NHY2 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RFWD2Q8NHY2 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFWD2Q8NHY2 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFWD2Q8NHY2 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFWD2Q8NHY2 AC046158.3-201ENST00000624947 2558 ntBASIC17.76■□□□□ 0.43
RFWD2Q8NHY2 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RFWD2Q8NHY2 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
RFWD2Q8NHY2 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.76■□□□□ 0.43
RFWD2Q8NHY2 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFWD2Q8NHY2 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFWD2Q8NHY2 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFWD2Q8NHY2 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.75■□□□□ 0.43
RFWD2Q8NHY2 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RFWD2Q8NHY2 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RFWD2Q8NHY2 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
RFWD2Q8NHY2 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RFWD2Q8NHY2 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.75■□□□□ 0.43
RFWD2Q8NHY2 MIR149-201ENST00000384879 89 ntBASIC17.75■□□□□ 0.43
RFWD2Q8NHY2 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFWD2Q8NHY2 NIFKP9-201ENST00000419265 221 ntBASIC17.75■□□□□ 0.43
RFWD2Q8NHY2 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RFWD2Q8NHY2 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.75■□□□□ 0.43
RFWD2Q8NHY2 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.75■□□□□ 0.43
RFWD2Q8NHY2 RPS2P4-201ENST00000476944 856 ntBASIC17.75■□□□□ 0.43
RFWD2Q8NHY2 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.75■□□□□ 0.43
RFWD2Q8NHY2 AC124016.1-201ENST00000609552 612 ntBASIC17.75■□□□□ 0.43
RFWD2Q8NHY2 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.75■□□□□ 0.43
RFWD2Q8NHY2 FAM197Y4-202ENST00000622692 608 ntBASIC17.75■□□□□ 0.43
RFWD2Q8NHY2 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RFWD2Q8NHY2 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RFWD2Q8NHY2 PCDH8P1-201ENST00000428983 2773 ntBASIC17.75■□□□□ 0.43
RFWD2Q8NHY2 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RFWD2Q8NHY2 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
RFWD2Q8NHY2 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.75■□□□□ 0.43
RFWD2Q8NHY2 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFWD2Q8NHY2 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFWD2Q8NHY2 AC100803.2-201ENST00000562459 1963 ntBASIC17.75■□□□□ 0.43
RFWD2Q8NHY2 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
RFWD2Q8NHY2 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RFWD2Q8NHY2 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFWD2Q8NHY2 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.74■□□□□ 0.43
RFWD2Q8NHY2 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFWD2Q8NHY2 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFWD2Q8NHY2 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RFWD2Q8NHY2 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RFWD2Q8NHY2 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
RFWD2Q8NHY2 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFWD2Q8NHY2 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFWD2Q8NHY2 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFWD2Q8NHY2 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RFWD2Q8NHY2 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RFWD2Q8NHY2 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFWD2Q8NHY2 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFWD2Q8NHY2 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RFWD2Q8NHY2 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RFWD2Q8NHY2 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.74■□□□□ 0.43
RFWD2Q8NHY2 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.74■□□□□ 0.43
RFWD2Q8NHY2 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.74■□□□□ 0.43
RFWD2Q8NHY2 MCCD1P1-208ENST00000445732 328 ntBASIC17.74■□□□□ 0.43
RFWD2Q8NHY2 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.74■□□□□ 0.43
RFWD2Q8NHY2 AC011298.2-201ENST00000617989 482 ntBASIC17.74■□□□□ 0.43
RFWD2Q8NHY2 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFWD2Q8NHY2 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFWD2Q8NHY2 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.74■□□□□ 0.43
RFWD2Q8NHY2 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.74■□□□□ 0.43
RFWD2Q8NHY2 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFWD2Q8NHY2 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFWD2Q8NHY2 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFWD2Q8NHY2 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.74■□□□□ 0.43
RFWD2Q8NHY2 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFWD2Q8NHY2 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFWD2Q8NHY2 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RFWD2Q8NHY2 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFWD2Q8NHY2 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFWD2Q8NHY2 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RFWD2Q8NHY2 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.73■□□□□ 0.43
RFWD2Q8NHY2 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFWD2Q8NHY2 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFWD2Q8NHY2 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFWD2Q8NHY2 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFWD2Q8NHY2 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
RFWD2Q8NHY2 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RFWD2Q8NHY2 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RFWD2Q8NHY2 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
RFWD2Q8NHY2 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RFWD2Q8NHY2 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms