Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.21□□□□□ -0.13
TTC9CQ8N5M4 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.21□□□□□ -0.13
TTC9CQ8N5M4 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.21□□□□□ -0.13
TTC9CQ8N5M4 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TTC9CQ8N5M4 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TTC9CQ8N5M4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TTC9CQ8N5M4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TTC9CQ8N5M4 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TTC9CQ8N5M4 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TTC9CQ8N5M4 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TTC9CQ8N5M4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
TTC9CQ8N5M4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
TTC9CQ8N5M4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC14.21□□□□□ -0.14
TTC9CQ8N5M4 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC14.21□□□□□ -0.14
TTC9CQ8N5M4 LINC00602-201ENST00000629776 2065 ntBASIC14.21□□□□□ -0.14
TTC9CQ8N5M4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
TTC9CQ8N5M4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
TTC9CQ8N5M4 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TTC9CQ8N5M4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC14.21□□□□□ -0.14
TTC9CQ8N5M4 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TTC9CQ8N5M4 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC14.21□□□□□ -0.14
TTC9CQ8N5M4 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TTC9CQ8N5M4 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 COPE-203ENST00000351079 907 ntTSL 2 BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 AC092647.4-201ENST00000457211 535 ntBASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 AC092597.1-201ENST00000487352 616 ntBASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 FGF14-AS2-201ENST00000606448 1074 ntBASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 GXYLT1P4-201ENST00000613576 1192 ntBASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TTC9CQ8N5M4 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TTC9CQ8N5M4 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC14.19□□□□□ -0.14
TTC9CQ8N5M4 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TTC9CQ8N5M4 AL133373.2-201ENST00000623187 2828 ntBASIC14.19□□□□□ -0.14
TTC9CQ8N5M4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TTC9CQ8N5M4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
TTC9CQ8N5M4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TTC9CQ8N5M4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TTC9CQ8N5M4 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TTC9CQ8N5M4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC14.19□□□□□ -0.14
TTC9CQ8N5M4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TTC9CQ8N5M4 GNAS-203ENST00000306120 1878 ntBASIC14.19□□□□□ -0.14
TTC9CQ8N5M4 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
TTC9CQ8N5M4 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
TTC9CQ8N5M4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TTC9CQ8N5M4 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TTC9CQ8N5M4 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TTC9CQ8N5M4 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TTC9CQ8N5M4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TTC9CQ8N5M4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC14.19□□□□□ -0.14
TTC9CQ8N5M4 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TTC9CQ8N5M4 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms