Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.45■□□□□ 0.7
VPS52Q8N1B4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS52Q8N1B4 AC009102.3-201ENST00000623118 1491 ntBASIC19.45■□□□□ 0.7
VPS52Q8N1B4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS52Q8N1B4 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS52Q8N1B4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS52Q8N1B4 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS52Q8N1B4 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
VPS52Q8N1B4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.45■□□□□ 0.7
VPS52Q8N1B4 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS52Q8N1B4 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.44■□□□□ 0.7
VPS52Q8N1B4 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VPS52Q8N1B4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VPS52Q8N1B4 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VPS52Q8N1B4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VPS52Q8N1B4 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VPS52Q8N1B4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VPS52Q8N1B4 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.44■□□□□ 0.7
VPS52Q8N1B4 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
VPS52Q8N1B4 RNA5SP419-201ENST00000515908 135 ntBASIC19.44■□□□□ 0.7
VPS52Q8N1B4 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
VPS52Q8N1B4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.44■□□□□ 0.7
VPS52Q8N1B4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.44■□□□□ 0.7
VPS52Q8N1B4 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.44■□□□□ 0.7
VPS52Q8N1B4 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.44■□□□□ 0.7
VPS52Q8N1B4 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.44■□□□□ 0.7
VPS52Q8N1B4 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.44■□□□□ 0.7
VPS52Q8N1B4 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.44■□□□□ 0.7
VPS52Q8N1B4 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VPS52Q8N1B4 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VPS52Q8N1B4 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VPS52Q8N1B4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VPS52Q8N1B4 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.44■□□□□ 0.7
VPS52Q8N1B4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VPS52Q8N1B4 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VPS52Q8N1B4 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
VPS52Q8N1B4 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.43■□□□□ 0.7
VPS52Q8N1B4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
VPS52Q8N1B4 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VPS52Q8N1B4 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VPS52Q8N1B4 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
VPS52Q8N1B4 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
VPS52Q8N1B4 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VPS52Q8N1B4 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VPS52Q8N1B4 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.43■□□□□ 0.7
VPS52Q8N1B4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VPS52Q8N1B4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VPS52Q8N1B4 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.43■□□□□ 0.7
VPS52Q8N1B4 AC132008.2-207ENST00000454517 770 ntBASIC19.43■□□□□ 0.7
VPS52Q8N1B4 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.43■□□□□ 0.7
VPS52Q8N1B4 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VPS52Q8N1B4 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.43■□□□□ 0.7
VPS52Q8N1B4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.43■□□□□ 0.7
VPS52Q8N1B4 AL671883.3-201ENST00000603274 991 ntBASIC19.43■□□□□ 0.7
VPS52Q8N1B4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VPS52Q8N1B4 AC083906.6-201ENST00000641366 219 ntBASIC19.43■□□□□ 0.7
VPS52Q8N1B4 AF228730.7-201ENST00000641842 219 ntBASIC19.43■□□□□ 0.7
VPS52Q8N1B4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VPS52Q8N1B4 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.43■□□□□ 0.7
VPS52Q8N1B4 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
VPS52Q8N1B4 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VPS52Q8N1B4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.43■□□□□ 0.7
VPS52Q8N1B4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.43■□□□□ 0.7
VPS52Q8N1B4 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
VPS52Q8N1B4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
VPS52Q8N1B4 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VPS52Q8N1B4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VPS52Q8N1B4 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VPS52Q8N1B4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
VPS52Q8N1B4 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
VPS52Q8N1B4 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
VPS52Q8N1B4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS52Q8N1B4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS52Q8N1B4 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
VPS52Q8N1B4 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS52Q8N1B4 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.42■□□□□ 0.7
VPS52Q8N1B4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS52Q8N1B4 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS52Q8N1B4 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.42■□□□□ 0.7
VPS52Q8N1B4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS52Q8N1B4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.42■□□□□ 0.7
VPS52Q8N1B4 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS52Q8N1B4 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS52Q8N1B4 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.42■□□□□ 0.7
VPS52Q8N1B4 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS52Q8N1B4 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.42■□□□□ 0.7
VPS52Q8N1B4 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.42■□□□□ 0.7
VPS52Q8N1B4 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.42■□□□□ 0.7
VPS52Q8N1B4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
VPS52Q8N1B4 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
VPS52Q8N1B4 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VPS52Q8N1B4 IL9RP2-201ENST00000423948 1312 ntBASIC19.42■□□□□ 0.7
VPS52Q8N1B4 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS52Q8N1B4 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.42■□□□□ 0.7
VPS52Q8N1B4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS52Q8N1B4 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.42■□□□□ 0.7
VPS52Q8N1B4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.42■□□□□ 0.7
VPS52Q8N1B4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VPS52Q8N1B4 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS52Q8N1B4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms