Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
NUDCD3Q8IVD9 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NUDCD3Q8IVD9 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NUDCD3Q8IVD9 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
NUDCD3Q8IVD9 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NUDCD3Q8IVD9 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
NUDCD3Q8IVD9 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
NUDCD3Q8IVD9 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
NUDCD3Q8IVD9 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.85■□□□□ 0.45
NUDCD3Q8IVD9 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.85■□□□□ 0.45
NUDCD3Q8IVD9 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.85■□□□□ 0.45
NUDCD3Q8IVD9 FAM197Y1-201ENST00000421178 764 ntBASIC17.85■□□□□ 0.45
NUDCD3Q8IVD9 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NUDCD3Q8IVD9 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NUDCD3Q8IVD9 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
NUDCD3Q8IVD9 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NUDCD3Q8IVD9 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.85■□□□□ 0.45
NUDCD3Q8IVD9 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.85■□□□□ 0.45
NUDCD3Q8IVD9 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NUDCD3Q8IVD9 MIR4674-201ENST00000582457 87 ntBASIC17.85■□□□□ 0.45
NUDCD3Q8IVD9 AL024508.2-201ENST00000607749 1894 ntBASIC17.85■□□□□ 0.45
NUDCD3Q8IVD9 DGCR10-201ENST00000609839 495 ntBASIC17.85■□□□□ 0.45
NUDCD3Q8IVD9 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.85■□□□□ 0.45
NUDCD3Q8IVD9 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NUDCD3Q8IVD9 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.85■□□□□ 0.45
NUDCD3Q8IVD9 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NUDCD3Q8IVD9 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
NUDCD3Q8IVD9 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
NUDCD3Q8IVD9 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NUDCD3Q8IVD9 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.84■□□□□ 0.45
NUDCD3Q8IVD9 AL121761.2-201ENST00000598007 1648 ntBASIC17.84■□□□□ 0.45
NUDCD3Q8IVD9 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NUDCD3Q8IVD9 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NUDCD3Q8IVD9 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NUDCD3Q8IVD9 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NUDCD3Q8IVD9 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NUDCD3Q8IVD9 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.84■□□□□ 0.45
NUDCD3Q8IVD9 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.84■□□□□ 0.45
NUDCD3Q8IVD9 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.84■□□□□ 0.45
NUDCD3Q8IVD9 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NUDCD3Q8IVD9 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.84■□□□□ 0.45
NUDCD3Q8IVD9 DUTP2-201ENST00000519164 463 ntBASIC17.84■□□□□ 0.45
NUDCD3Q8IVD9 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.84■□□□□ 0.45
NUDCD3Q8IVD9 KRT18P6-201ENST00000555540 1265 ntBASIC17.84■□□□□ 0.45
NUDCD3Q8IVD9 AC009065.1-201ENST00000564055 1225 ntBASIC17.84■□□□□ 0.45
NUDCD3Q8IVD9 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NUDCD3Q8IVD9 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
NUDCD3Q8IVD9 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
NUDCD3Q8IVD9 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.84■□□□□ 0.45
NUDCD3Q8IVD9 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NUDCD3Q8IVD9 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.83■□□□□ 0.45
NUDCD3Q8IVD9 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.45
NUDCD3Q8IVD9 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
NUDCD3Q8IVD9 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
NUDCD3Q8IVD9 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
NUDCD3Q8IVD9 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NUDCD3Q8IVD9 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.83■□□□□ 0.45
NUDCD3Q8IVD9 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
NUDCD3Q8IVD9 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NUDCD3Q8IVD9 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.83■□□□□ 0.45
NUDCD3Q8IVD9 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
NUDCD3Q8IVD9 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NUDCD3Q8IVD9 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.83■□□□□ 0.44
NUDCD3Q8IVD9 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NUDCD3Q8IVD9 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NUDCD3Q8IVD9 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
NUDCD3Q8IVD9 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.83■□□□□ 0.44
NUDCD3Q8IVD9 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.83■□□□□ 0.44
NUDCD3Q8IVD9 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.83■□□□□ 0.44
NUDCD3Q8IVD9 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.83■□□□□ 0.44
NUDCD3Q8IVD9 AC097488.1-201ENST00000507834 756 ntBASIC17.83■□□□□ 0.44
NUDCD3Q8IVD9 RPPH1-201ENST00000516869 333 ntBASIC17.83■□□□□ 0.44
NUDCD3Q8IVD9 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.83■□□□□ 0.44
NUDCD3Q8IVD9 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.83■□□□□ 0.44
NUDCD3Q8IVD9 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NUDCD3Q8IVD9 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.83■□□□□ 0.44
NUDCD3Q8IVD9 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
NUDCD3Q8IVD9 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.83■□□□□ 0.44
NUDCD3Q8IVD9 NFIC-211ENST00000641145 8399 ntBASIC17.83■□□□□ 0.44
NUDCD3Q8IVD9 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
NUDCD3Q8IVD9 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NUDCD3Q8IVD9 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.83■□□□□ 0.44
NUDCD3Q8IVD9 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NUDCD3Q8IVD9 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
NUDCD3Q8IVD9 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NUDCD3Q8IVD9 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NUDCD3Q8IVD9 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
NUDCD3Q8IVD9 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NUDCD3Q8IVD9 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NUDCD3Q8IVD9 AC100803.2-201ENST00000562459 1963 ntBASIC17.82■□□□□ 0.44
NUDCD3Q8IVD9 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NUDCD3Q8IVD9 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.82■□□□□ 0.44
NUDCD3Q8IVD9 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
NUDCD3Q8IVD9 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NUDCD3Q8IVD9 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
NUDCD3Q8IVD9 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NUDCD3Q8IVD9 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NUDCD3Q8IVD9 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
NUDCD3Q8IVD9 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NUDCD3Q8IVD9 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms