Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PACS2Q86VP3 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PACS2Q86VP3 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.08■□□□□ 0.48
PACS2Q86VP3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.48
PACS2Q86VP3 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PACS2Q86VP3 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PACS2Q86VP3 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.07■□□□□ 0.48
PACS2Q86VP3 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PACS2Q86VP3 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC18.07■□□□□ 0.48
PACS2Q86VP3 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.07■□□□□ 0.48
PACS2Q86VP3 LYSMD4-203ENST00000378904 2122 ntBASIC18.07■□□□□ 0.48
PACS2Q86VP3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PACS2Q86VP3 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PACS2Q86VP3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PACS2Q86VP3 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.07■□□□□ 0.48
PACS2Q86VP3 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PACS2Q86VP3 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.07■□□□□ 0.48
PACS2Q86VP3 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PACS2Q86VP3 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PACS2Q86VP3 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.07■□□□□ 0.48
PACS2Q86VP3 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.07■□□□□ 0.48
PACS2Q86VP3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
PACS2Q86VP3 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.07■□□□□ 0.48
PACS2Q86VP3 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.07■□□□□ 0.48
PACS2Q86VP3 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PACS2Q86VP3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PACS2Q86VP3 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.07■□□□□ 0.48
PACS2Q86VP3 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PACS2Q86VP3 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PACS2Q86VP3 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC18.07■□□□□ 0.48
PACS2Q86VP3 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PACS2Q86VP3 NBPF21P-201ENST00000425093 1451 ntBASIC18.07■□□□□ 0.48
PACS2Q86VP3 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PACS2Q86VP3 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.06■□□□□ 0.48
PACS2Q86VP3 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PACS2Q86VP3 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PACS2Q86VP3 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PACS2Q86VP3 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PACS2Q86VP3 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PACS2Q86VP3 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PACS2Q86VP3 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
PACS2Q86VP3 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.06■□□□□ 0.48
PACS2Q86VP3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
PACS2Q86VP3 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PACS2Q86VP3 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PACS2Q86VP3 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PACS2Q86VP3 AC006116.8-202ENST00000587620 1550 ntBASIC18.06■□□□□ 0.48
PACS2Q86VP3 AC116351.2-201ENST00000606540 1585 ntBASIC18.06■□□□□ 0.48
PACS2Q86VP3 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PACS2Q86VP3 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PACS2Q86VP3 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.06■□□□□ 0.48
PACS2Q86VP3 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PACS2Q86VP3 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PACS2Q86VP3 AC004264.1-201ENST00000608354 794 ntBASIC18.06■□□□□ 0.48
PACS2Q86VP3 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.06■□□□□ 0.48
PACS2Q86VP3 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.06■□□□□ 0.48
PACS2Q86VP3 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PACS2Q86VP3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.06■□□□□ 0.48
PACS2Q86VP3 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
PACS2Q86VP3 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PACS2Q86VP3 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PACS2Q86VP3 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PACS2Q86VP3 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PACS2Q86VP3 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PACS2Q86VP3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PACS2Q86VP3 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
PACS2Q86VP3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PACS2Q86VP3 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
PACS2Q86VP3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PACS2Q86VP3 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PACS2Q86VP3 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PACS2Q86VP3 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PACS2Q86VP3 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.06■□□□□ 0.48
PACS2Q86VP3 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PACS2Q86VP3 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
PACS2Q86VP3 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PACS2Q86VP3 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PACS2Q86VP3 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PACS2Q86VP3 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PACS2Q86VP3 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PACS2Q86VP3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.05■□□□□ 0.48
PACS2Q86VP3 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PACS2Q86VP3 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PACS2Q86VP3 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PACS2Q86VP3 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PACS2Q86VP3 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC18.05■□□□□ 0.48
PACS2Q86VP3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PACS2Q86VP3 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.05■□□□□ 0.48
PACS2Q86VP3 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PACS2Q86VP3 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.05■□□□□ 0.48
PACS2Q86VP3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PACS2Q86VP3 FLJ13224-201ENST00000313737 1514 ntBASIC18.05■□□□□ 0.48
PACS2Q86VP3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PACS2Q86VP3 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PACS2Q86VP3 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PACS2Q86VP3 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PACS2Q86VP3 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
PACS2Q86VP3 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.05■□□□□ 0.48
PACS2Q86VP3 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PACS2Q86VP3 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms