Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21.97■■□□□ 1.11
USP48Q86UV5 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
USP48Q86UV5 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
USP48Q86UV5 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
USP48Q86UV5 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
USP48Q86UV5 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC21.97■■□□□ 1.11
USP48Q86UV5 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
USP48Q86UV5 PGAM5P1-201ENST00000518923 814 ntBASIC21.97■■□□□ 1.11
USP48Q86UV5 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC21.97■■□□□ 1.11
USP48Q86UV5 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
USP48Q86UV5 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC21.97■■□□□ 1.11
USP48Q86UV5 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
USP48Q86UV5 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.97■■□□□ 1.11
USP48Q86UV5 AC034236.2-201ENST00000606662 1610 ntBASIC21.97■■□□□ 1.11
USP48Q86UV5 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
USP48Q86UV5 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
USP48Q86UV5 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
USP48Q86UV5 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
USP48Q86UV5 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
USP48Q86UV5 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
USP48Q86UV5 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
USP48Q86UV5 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
USP48Q86UV5 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
USP48Q86UV5 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
USP48Q86UV5 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
USP48Q86UV5 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
USP48Q86UV5 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
USP48Q86UV5 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
USP48Q86UV5 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
USP48Q86UV5 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
USP48Q86UV5 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
USP48Q86UV5 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
USP48Q86UV5 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
USP48Q86UV5 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
USP48Q86UV5 HIST2H3DP1-201ENST00000401004 416 ntBASIC21.96■■□□□ 1.11
USP48Q86UV5 THAP5-204ENST00000438865 868 ntTSL 2 BASIC21.96■■□□□ 1.11
USP48Q86UV5 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
USP48Q86UV5 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
USP48Q86UV5 AC114341.1-201ENST00000618070 349 ntBASIC21.96■■□□□ 1.11
USP48Q86UV5 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
USP48Q86UV5 CAND2-206ENST00000626378 333 ntTSL 5 BASIC21.96■■□□□ 1.11
USP48Q86UV5 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
USP48Q86UV5 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
USP48Q86UV5 CD276-201ENST00000318424 2738 ntTSL 5 BASIC21.96■■□□□ 1.11
USP48Q86UV5 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC21.96■■□□□ 1.11
USP48Q86UV5 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
USP48Q86UV5 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
USP48Q86UV5 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
USP48Q86UV5 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC21.96■■□□□ 1.11
USP48Q86UV5 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
USP48Q86UV5 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
USP48Q86UV5 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
USP48Q86UV5 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
USP48Q86UV5 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
USP48Q86UV5 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.95■■□□□ 1.11
USP48Q86UV5 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.11
USP48Q86UV5 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
USP48Q86UV5 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
USP48Q86UV5 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC21.95■■□□□ 1.1
USP48Q86UV5 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
USP48Q86UV5 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
USP48Q86UV5 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
USP48Q86UV5 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
USP48Q86UV5 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
USP48Q86UV5 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC21.95■■□□□ 1.1
USP48Q86UV5 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC21.95■■□□□ 1.1
USP48Q86UV5 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.95■■□□□ 1.1
USP48Q86UV5 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC21.95■■□□□ 1.1
USP48Q86UV5 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
USP48Q86UV5 AL355877.3-201ENST00000622820 899 ntBASIC21.95■■□□□ 1.1
USP48Q86UV5 AC083906.6-201ENST00000641366 219 ntBASIC21.95■■□□□ 1.1
USP48Q86UV5 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
USP48Q86UV5 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC21.95■■□□□ 1.1
USP48Q86UV5 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
USP48Q86UV5 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
USP48Q86UV5 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
USP48Q86UV5 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
USP48Q86UV5 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
USP48Q86UV5 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
USP48Q86UV5 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC21.95■■□□□ 1.1
USP48Q86UV5 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
USP48Q86UV5 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
USP48Q86UV5 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
USP48Q86UV5 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
USP48Q86UV5 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
USP48Q86UV5 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC21.94■■□□□ 1.1
USP48Q86UV5 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
USP48Q86UV5 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
USP48Q86UV5 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
USP48Q86UV5 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
USP48Q86UV5 FGFR3P6-201ENST00000457012 610 ntBASIC21.94■■□□□ 1.1
USP48Q86UV5 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC21.94■■□□□ 1.1
USP48Q86UV5 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
USP48Q86UV5 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
USP48Q86UV5 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC21.94■■□□□ 1.1
USP48Q86UV5 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC21.94■■□□□ 1.1
USP48Q86UV5 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
USP48Q86UV5 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
USP48Q86UV5 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
USP48Q86UV5 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms