Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.32■□□□□ 0.52
DENND4AQ7Z401 SNHG9-202ENST00000564014 471 ntBASIC18.32■□□□□ 0.52
DENND4AQ7Z401 AL031432.2-201ENST00000566714 459 ntBASIC18.32■□□□□ 0.52
DENND4AQ7Z401 AL928711.1-201ENST00000570165 459 ntBASIC18.32■□□□□ 0.52
DENND4AQ7Z401 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.32■□□□□ 0.52
DENND4AQ7Z401 SIRPAP1-201ENST00000448467 1770 ntBASIC18.32■□□□□ 0.52
DENND4AQ7Z401 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DENND4AQ7Z401 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DENND4AQ7Z401 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DENND4AQ7Z401 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
DENND4AQ7Z401 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DENND4AQ7Z401 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.31■□□□□ 0.52
DENND4AQ7Z401 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.31■□□□□ 0.52
DENND4AQ7Z401 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
DENND4AQ7Z401 PRSS29P-201ENST00000440800 595 ntBASIC18.31■□□□□ 0.52
DENND4AQ7Z401 IGHV3-65-201ENST00000523210 341 ntBASIC18.31■□□□□ 0.52
DENND4AQ7Z401 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.31■□□□□ 0.52
DENND4AQ7Z401 KRT19P2-202ENST00000557173 1012 ntBASIC18.31■□□□□ 0.52
DENND4AQ7Z401 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
DENND4AQ7Z401 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.31■□□□□ 0.52
DENND4AQ7Z401 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DENND4AQ7Z401 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.31■□□□□ 0.52
DENND4AQ7Z401 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
DENND4AQ7Z401 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.31■□□□□ 0.52
DENND4AQ7Z401 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DENND4AQ7Z401 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DENND4AQ7Z401 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.31■□□□□ 0.52
DENND4AQ7Z401 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.31■□□□□ 0.52
DENND4AQ7Z401 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.31■□□□□ 0.52
DENND4AQ7Z401 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DENND4AQ7Z401 FAM8A3P-201ENST00000427218 844 ntBASIC18.31■□□□□ 0.52
DENND4AQ7Z401 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.31■□□□□ 0.52
DENND4AQ7Z401 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.31■□□□□ 0.52
DENND4AQ7Z401 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DENND4AQ7Z401 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.31■□□□□ 0.52
DENND4AQ7Z401 AC019129.2-201ENST00000609837 1235 ntBASIC18.31■□□□□ 0.52
DENND4AQ7Z401 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
DENND4AQ7Z401 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.3■□□□□ 0.52
DENND4AQ7Z401 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.3■□□□□ 0.52
DENND4AQ7Z401 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DENND4AQ7Z401 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.3■□□□□ 0.52
DENND4AQ7Z401 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
DENND4AQ7Z401 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DENND4AQ7Z401 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
DENND4AQ7Z401 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
DENND4AQ7Z401 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DENND4AQ7Z401 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DENND4AQ7Z401 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DENND4AQ7Z401 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DENND4AQ7Z401 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.3■□□□□ 0.52
DENND4AQ7Z401 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DENND4AQ7Z401 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.3■□□□□ 0.52
DENND4AQ7Z401 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.3■□□□□ 0.52
DENND4AQ7Z401 AC068137.2-201ENST00000605408 478 ntBASIC18.3■□□□□ 0.52
DENND4AQ7Z401 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.3■□□□□ 0.52
DENND4AQ7Z401 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.3■□□□□ 0.52
DENND4AQ7Z401 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DENND4AQ7Z401 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DENND4AQ7Z401 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DENND4AQ7Z401 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
DENND4AQ7Z401 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
DENND4AQ7Z401 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
DENND4AQ7Z401 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
DENND4AQ7Z401 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DENND4AQ7Z401 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DENND4AQ7Z401 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
DENND4AQ7Z401 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.29■□□□□ 0.52
DENND4AQ7Z401 RHOQP3-201ENST00000437982 621 ntBASIC18.29■□□□□ 0.52
DENND4AQ7Z401 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
DENND4AQ7Z401 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.29■□□□□ 0.52
DENND4AQ7Z401 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.29■□□□□ 0.52
DENND4AQ7Z401 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
DENND4AQ7Z401 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.29■□□□□ 0.52
DENND4AQ7Z401 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
DENND4AQ7Z401 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.29■□□□□ 0.52
DENND4AQ7Z401 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
DENND4AQ7Z401 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
DENND4AQ7Z401 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DENND4AQ7Z401 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.29■□□□□ 0.52
DENND4AQ7Z401 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
DENND4AQ7Z401 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.29■□□□□ 0.52
DENND4AQ7Z401 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.29■□□□□ 0.52
DENND4AQ7Z401 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.29■□□□□ 0.52
DENND4AQ7Z401 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.29■□□□□ 0.52
DENND4AQ7Z401 AC093512.1-201ENST00000617969 520 ntBASIC18.29■□□□□ 0.52
DENND4AQ7Z401 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
DENND4AQ7Z401 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DENND4AQ7Z401 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
DENND4AQ7Z401 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.28■□□□□ 0.52
DENND4AQ7Z401 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DENND4AQ7Z401 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.28■□□□□ 0.52
DENND4AQ7Z401 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.28■□□□□ 0.52
DENND4AQ7Z401 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
DENND4AQ7Z401 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DENND4AQ7Z401 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
DENND4AQ7Z401 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DENND4AQ7Z401 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DENND4AQ7Z401 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
DENND4AQ7Z401 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DENND4AQ7Z401 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms