Protein–RNA interactions for Protein: Q7Z2R9

SSBP3-AS1, Putative uncharacterized protein SSBP3-AS1, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-AS1Q7Z2R9 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SSBP3-AS1Q7Z2R9 HLA-DQB1-201ENST00000374943 1656 ntBASIC10.66□□□□□ -0.7
SSBP3-AS1Q7Z2R9 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC10.66□□□□□ -0.7
SSBP3-AS1Q7Z2R9 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SSBP3-AS1Q7Z2R9 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SSBP3-AS1Q7Z2R9 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SSBP3-AS1Q7Z2R9 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SSBP3-AS1Q7Z2R9 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 AC113347.1-201ENST00000413321 391 ntBASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 KRT18P48-201ENST00000434763 852 ntBASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 HOMER2P1-201ENST00000455653 964 ntBASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 RASA4DP-201ENST00000460726 1199 ntBASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 GXYLT1P4-201ENST00000613576 1192 ntBASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SSBP3-AS1Q7Z2R9 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC10.65□□□□□ -0.71
SSBP3-AS1Q7Z2R9 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
SSBP3-AS1Q7Z2R9 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
SSBP3-AS1Q7Z2R9 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
SSBP3-AS1Q7Z2R9 AC007613.1-201ENST00000572811 2597 ntBASIC10.65□□□□□ -0.71
SSBP3-AS1Q7Z2R9 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
SSBP3-AS1Q7Z2R9 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
SSBP3-AS1Q7Z2R9 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC10.64□□□□□ -0.71
SSBP3-AS1Q7Z2R9 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SSBP3-AS1Q7Z2R9 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
SSBP3-AS1Q7Z2R9 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
SSBP3-AS1Q7Z2R9 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SSBP3-AS1Q7Z2R9 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC10.64□□□□□ -0.71
SSBP3-AS1Q7Z2R9 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC10.64□□□□□ -0.71
SSBP3-AS1Q7Z2R9 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC10.64□□□□□ -0.71
SSBP3-AS1Q7Z2R9 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
SSBP3-AS1Q7Z2R9 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
SSBP3-AS1Q7Z2R9 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
SSBP3-AS1Q7Z2R9 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC10.64□□□□□ -0.71
SSBP3-AS1Q7Z2R9 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SSBP3-AS1Q7Z2R9 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC10.64□□□□□ -0.71
SSBP3-AS1Q7Z2R9 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SSBP3-AS1Q7Z2R9 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SSBP3-AS1Q7Z2R9 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SSBP3-AS1Q7Z2R9 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SSBP3-AS1Q7Z2R9 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
SSBP3-AS1Q7Z2R9 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC10.64□□□□□ -0.71
SSBP3-AS1Q7Z2R9 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC10.64□□□□□ -0.71
SSBP3-AS1Q7Z2R9 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC10.64□□□□□ -0.71
SSBP3-AS1Q7Z2R9 STARP1-201ENST00000397973 869 ntBASIC10.64□□□□□ -0.71
SSBP3-AS1Q7Z2R9 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC10.64□□□□□ -0.71
SSBP3-AS1Q7Z2R9 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC10.64□□□□□ -0.71
SSBP3-AS1Q7Z2R9 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC10.64□□□□□ -0.71
SSBP3-AS1Q7Z2R9 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC10.64□□□□□ -0.71
SSBP3-AS1Q7Z2R9 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC10.64□□□□□ -0.71
SSBP3-AS1Q7Z2R9 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SSBP3-AS1Q7Z2R9 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC10.64□□□□□ -0.71
SSBP3-AS1Q7Z2R9 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
SSBP3-AS1Q7Z2R9 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SSBP3-AS1Q7Z2R9 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
SSBP3-AS1Q7Z2R9 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
SSBP3-AS1Q7Z2R9 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms