Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VPS13CQ709C8 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS13CQ709C8 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS13CQ709C8 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.85□□□□□ -0.03
VPS13CQ709C8 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPS13CQ709C8 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.85□□□□□ -0.03
VPS13CQ709C8 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.85□□□□□ -0.03
VPS13CQ709C8 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.85□□□□□ -0.03
VPS13CQ709C8 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPS13CQ709C8 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.85□□□□□ -0.03
VPS13CQ709C8 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VPS13CQ709C8 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPS13CQ709C8 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC14.85□□□□□ -0.03
VPS13CQ709C8 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC14.85□□□□□ -0.03
VPS13CQ709C8 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPS13CQ709C8 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.85□□□□□ -0.03
VPS13CQ709C8 VN2R19P-201ENST00000442399 1052 ntBASIC14.85□□□□□ -0.03
VPS13CQ709C8 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPS13CQ709C8 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.85□□□□□ -0.03
VPS13CQ709C8 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.85□□□□□ -0.03
VPS13CQ709C8 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.85□□□□□ -0.03
VPS13CQ709C8 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VPS13CQ709C8 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC14.85□□□□□ -0.03
VPS13CQ709C8 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPS13CQ709C8 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VPS13CQ709C8 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC14.85□□□□□ -0.03
VPS13CQ709C8 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VPS13CQ709C8 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPS13CQ709C8 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.85□□□□□ -0.03
VPS13CQ709C8 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPS13CQ709C8 IGLL3P-201ENST00000412472 434 ntBASIC14.85□□□□□ -0.03
VPS13CQ709C8 CEND1P1-201ENST00000451006 455 ntBASIC14.85□□□□□ -0.03
VPS13CQ709C8 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.85□□□□□ -0.03
VPS13CQ709C8 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.85□□□□□ -0.03
VPS13CQ709C8 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
VPS13CQ709C8 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC14.85□□□□□ -0.03
VPS13CQ709C8 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VPS13CQ709C8 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.84□□□□□ -0.03
VPS13CQ709C8 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VPS13CQ709C8 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VPS13CQ709C8 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
VPS13CQ709C8 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS13CQ709C8 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VPS13CQ709C8 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.84□□□□□ -0.03
VPS13CQ709C8 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
VPS13CQ709C8 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.84□□□□□ -0.03
VPS13CQ709C8 AJ011932.1-201ENST00000621707 465 ntBASIC14.84□□□□□ -0.03
VPS13CQ709C8 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
VPS13CQ709C8 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VPS13CQ709C8 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC14.84□□□□□ -0.03
VPS13CQ709C8 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC14.84□□□□□ -0.03
VPS13CQ709C8 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC14.84□□□□□ -0.03
VPS13CQ709C8 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC14.84□□□□□ -0.03
VPS13CQ709C8 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS13CQ709C8 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS13CQ709C8 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VPS13CQ709C8 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
VPS13CQ709C8 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS13CQ709C8 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VPS13CQ709C8 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.84□□□□□ -0.03
VPS13CQ709C8 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS13CQ709C8 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.84□□□□□ -0.03
VPS13CQ709C8 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.84□□□□□ -0.03
VPS13CQ709C8 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.84□□□□□ -0.03
VPS13CQ709C8 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS13CQ709C8 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS13CQ709C8 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS13CQ709C8 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC14.84□□□□□ -0.03
VPS13CQ709C8 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.84□□□□□ -0.03
VPS13CQ709C8 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
VPS13CQ709C8 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS13CQ709C8 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC14.84□□□□□ -0.03
VPS13CQ709C8 PRSS29P-201ENST00000440800 595 ntBASIC14.84□□□□□ -0.03
VPS13CQ709C8 PRYP5-201ENST00000451909 266 ntBASIC14.84□□□□□ -0.03
VPS13CQ709C8 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.84□□□□□ -0.03
VPS13CQ709C8 LINC00628-201ENST00000628516 1289 ntBASIC14.84□□□□□ -0.03
VPS13CQ709C8 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC14.84□□□□□ -0.03
VPS13CQ709C8 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VPS13CQ709C8 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
VPS13CQ709C8 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
VPS13CQ709C8 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.83□□□□□ -0.03
VPS13CQ709C8 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
VPS13CQ709C8 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.03
VPS13CQ709C8 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
VPS13CQ709C8 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
VPS13CQ709C8 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.83□□□□□ -0.03
VPS13CQ709C8 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC14.83□□□□□ -0.04
VPS13CQ709C8 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VPS13CQ709C8 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC14.83□□□□□ -0.04
VPS13CQ709C8 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
VPS13CQ709C8 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS13CQ709C8 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VPS13CQ709C8 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS13CQ709C8 AC002472.2-201ENST00000442739 958 ntBASIC14.83□□□□□ -0.04
VPS13CQ709C8 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VPS13CQ709C8 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS13CQ709C8 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS13CQ709C8 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
VPS13CQ709C8 AC126763.1-201ENST00000552015 2118 ntBASIC14.83□□□□□ -0.04
VPS13CQ709C8 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms