Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC149Q6ZUS6 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC149Q6ZUS6 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC149Q6ZUS6 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC149Q6ZUS6 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC149Q6ZUS6 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CCDC149Q6ZUS6 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC149Q6ZUS6 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC149Q6ZUS6 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC149Q6ZUS6 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC149Q6ZUS6 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC149Q6ZUS6 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC149Q6ZUS6 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC149Q6ZUS6 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC149Q6ZUS6 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC149Q6ZUS6 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC149Q6ZUS6 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
CCDC149Q6ZUS6 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CCDC149Q6ZUS6 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC149Q6ZUS6 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC149Q6ZUS6 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC149Q6ZUS6 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC149Q6ZUS6 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC149Q6ZUS6 AC122714.2-201ENST00000502787 707 ntBASIC18.78■□□□□ 0.6
CCDC149Q6ZUS6 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC149Q6ZUS6 AC105339.3-201ENST00000560043 636 ntBASIC18.78■□□□□ 0.6
CCDC149Q6ZUS6 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC149Q6ZUS6 MTDHP4-201ENST00000600287 670 ntBASIC18.78■□□□□ 0.6
CCDC149Q6ZUS6 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.78■□□□□ 0.6
CCDC149Q6ZUS6 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC149Q6ZUS6 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC149Q6ZUS6 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC149Q6ZUS6 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CCDC149Q6ZUS6 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
CCDC149Q6ZUS6 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC149Q6ZUS6 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC149Q6ZUS6 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC149Q6ZUS6 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC149Q6ZUS6 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC149Q6ZUS6 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CCDC149Q6ZUS6 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC149Q6ZUS6 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC149Q6ZUS6 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC149Q6ZUS6 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC149Q6ZUS6 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC149Q6ZUS6 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
CCDC149Q6ZUS6 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CCDC149Q6ZUS6 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC149Q6ZUS6 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC149Q6ZUS6 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC149Q6ZUS6 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC149Q6ZUS6 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC149Q6ZUS6 RPS8P6-201ENST00000426177 609 ntBASIC18.77■□□□□ 0.6
CCDC149Q6ZUS6 HMGN1P19-201ENST00000436976 333 ntBASIC18.77■□□□□ 0.6
CCDC149Q6ZUS6 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC149Q6ZUS6 AC004967.1-201ENST00000453589 447 ntBASIC18.77■□□□□ 0.6
CCDC149Q6ZUS6 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC149Q6ZUS6 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC149Q6ZUS6 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
CCDC149Q6ZUS6 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.77■□□□□ 0.6
CCDC149Q6ZUS6 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC149Q6ZUS6 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC149Q6ZUS6 AC107918.4-202ENST00000641623 219 ntBASIC18.77■□□□□ 0.6
CCDC149Q6ZUS6 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC149Q6ZUS6 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CCDC149Q6ZUS6 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC149Q6ZUS6 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC149Q6ZUS6 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC149Q6ZUS6 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.77■□□□□ 0.59
CCDC149Q6ZUS6 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC149Q6ZUS6 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC149Q6ZUS6 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC149Q6ZUS6 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CCDC149Q6ZUS6 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CCDC149Q6ZUS6 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC149Q6ZUS6 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC149Q6ZUS6 AC126763.1-201ENST00000552015 2118 ntBASIC18.76■□□□□ 0.59
CCDC149Q6ZUS6 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC149Q6ZUS6 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC149Q6ZUS6 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CCDC149Q6ZUS6 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CCDC149Q6ZUS6 AC093010.1-201ENST00000473625 1624 ntBASIC18.76■□□□□ 0.59
CCDC149Q6ZUS6 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC149Q6ZUS6 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CCDC149Q6ZUS6 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.76■□□□□ 0.59
CCDC149Q6ZUS6 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC149Q6ZUS6 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.76■□□□□ 0.59
CCDC149Q6ZUS6 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC149Q6ZUS6 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.76■□□□□ 0.59
CCDC149Q6ZUS6 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.76■□□□□ 0.59
CCDC149Q6ZUS6 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.76■□□□□ 0.59
CCDC149Q6ZUS6 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.76■□□□□ 0.59
CCDC149Q6ZUS6 AL355385.1-201ENST00000606123 409 ntBASIC18.76■□□□□ 0.59
CCDC149Q6ZUS6 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CCDC149Q6ZUS6 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC149Q6ZUS6 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC149Q6ZUS6 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC149Q6ZUS6 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC149Q6ZUS6 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CCDC149Q6ZUS6 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms