Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.31■□□□□ 0.36
NIPAL1Q6NVV3 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
NIPAL1Q6NVV3 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NIPAL1Q6NVV3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NIPAL1Q6NVV3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
NIPAL1Q6NVV3 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.31■□□□□ 0.36
NIPAL1Q6NVV3 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NIPAL1Q6NVV3 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
NIPAL1Q6NVV3 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
NIPAL1Q6NVV3 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 AC126763.1-201ENST00000552015 2118 ntBASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 AP003733.1-201ENST00000491725 852 ntBASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL1Q6NVV3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
NIPAL1Q6NVV3 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NIPAL1Q6NVV3 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.29■□□□□ 0.36
NIPAL1Q6NVV3 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NIPAL1Q6NVV3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
NIPAL1Q6NVV3 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NIPAL1Q6NVV3 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.29■□□□□ 0.36
NIPAL1Q6NVV3 AL356309.3-201ENST00000624132 1934 ntBASIC17.29■□□□□ 0.36
NIPAL1Q6NVV3 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.29■□□□□ 0.36
NIPAL1Q6NVV3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.29■□□□□ 0.36
NIPAL1Q6NVV3 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NIPAL1Q6NVV3 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NIPAL1Q6NVV3 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.29■□□□□ 0.36
NIPAL1Q6NVV3 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NIPAL1Q6NVV3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NIPAL1Q6NVV3 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
NIPAL1Q6NVV3 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NIPAL1Q6NVV3 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.29■□□□□ 0.36
NIPAL1Q6NVV3 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.29■□□□□ 0.36
NIPAL1Q6NVV3 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
NIPAL1Q6NVV3 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.29■□□□□ 0.36
NIPAL1Q6NVV3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.29■□□□□ 0.36
NIPAL1Q6NVV3 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.29■□□□□ 0.36
NIPAL1Q6NVV3 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NIPAL1Q6NVV3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NIPAL1Q6NVV3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NIPAL1Q6NVV3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NIPAL1Q6NVV3 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NIPAL1Q6NVV3 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NIPAL1Q6NVV3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NIPAL1Q6NVV3 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NIPAL1Q6NVV3 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
NIPAL1Q6NVV3 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NIPAL1Q6NVV3 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.29■□□□□ 0.36
NIPAL1Q6NVV3 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.29■□□□□ 0.36
NIPAL1Q6NVV3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NIPAL1Q6NVV3 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.29■□□□□ 0.36
NIPAL1Q6NVV3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NIPAL1Q6NVV3 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NIPAL1Q6NVV3 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NIPAL1Q6NVV3 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NIPAL1Q6NVV3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.28■□□□□ 0.36
NIPAL1Q6NVV3 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NIPAL1Q6NVV3 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms