Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF43Q68DV7 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF43Q68DV7 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.82■□□□□ 0.6
RNF43Q68DV7 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF43Q68DV7 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF43Q68DV7 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.82■□□□□ 0.6
RNF43Q68DV7 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.82■□□□□ 0.6
RNF43Q68DV7 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF43Q68DV7 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.82■□□□□ 0.6
RNF43Q68DV7 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.82■□□□□ 0.6
RNF43Q68DV7 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RNF43Q68DV7 AC005332.3-201ENST00000589904 676 ntBASIC18.82■□□□□ 0.6
RNF43Q68DV7 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF43Q68DV7 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF43Q68DV7 AC009102.3-201ENST00000623118 1491 ntBASIC18.82■□□□□ 0.6
RNF43Q68DV7 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF43Q68DV7 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF43Q68DV7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF43Q68DV7 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF43Q68DV7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.82■□□□□ 0.6
RNF43Q68DV7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.81■□□□□ 0.6
RNF43Q68DV7 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RNF43Q68DV7 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF43Q68DV7 SIRPAP1-201ENST00000448467 1770 ntBASIC18.81■□□□□ 0.6
RNF43Q68DV7 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RNF43Q68DV7 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF43Q68DV7 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF43Q68DV7 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF43Q68DV7 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF43Q68DV7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF43Q68DV7 CHCHD2P8-201ENST00000429873 447 ntBASIC18.81■□□□□ 0.6
RNF43Q68DV7 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF43Q68DV7 AC009078.2-202ENST00000463353 338 ntBASIC18.81■□□□□ 0.6
RNF43Q68DV7 AP003733.1-201ENST00000491725 852 ntBASIC18.81■□□□□ 0.6
RNF43Q68DV7 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.81■□□□□ 0.6
RNF43Q68DV7 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.81■□□□□ 0.6
RNF43Q68DV7 IFNL4P1-201ENST00000607083 540 ntBASIC18.81■□□□□ 0.6
RNF43Q68DV7 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.81■□□□□ 0.6
RNF43Q68DV7 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RNF43Q68DV7 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF43Q68DV7 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RNF43Q68DV7 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF43Q68DV7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF43Q68DV7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF43Q68DV7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF43Q68DV7 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF43Q68DV7 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF43Q68DV7 Z83836.1-201ENST00000624605 1642 ntBASIC18.81■□□□□ 0.6
RNF43Q68DV7 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF43Q68DV7 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF43Q68DV7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
RNF43Q68DV7 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF43Q68DV7 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RNF43Q68DV7 AC009053.2-201ENST00000563701 2365 ntBASIC18.81■□□□□ 0.6
RNF43Q68DV7 AL499627.1-201ENST00000569373 2188 ntBASIC18.81■□□□□ 0.6
RNF43Q68DV7 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.81■□□□□ 0.6
RNF43Q68DV7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF43Q68DV7 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF43Q68DV7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.8■□□□□ 0.6
RNF43Q68DV7 AC012313.1-201ENST00000593393 3059 ntBASIC18.8■□□□□ 0.6
RNF43Q68DV7 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF43Q68DV7 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF43Q68DV7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF43Q68DV7 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF43Q68DV7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.8■□□□□ 0.6
RNF43Q68DV7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF43Q68DV7 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF43Q68DV7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF43Q68DV7 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF43Q68DV7 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF43Q68DV7 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF43Q68DV7 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF43Q68DV7 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF43Q68DV7 AC113404.2-201ENST00000507884 177 ntBASIC18.8■□□□□ 0.6
RNF43Q68DV7 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF43Q68DV7 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF43Q68DV7 GPR32P1-201ENST00000601788 811 ntBASIC18.8■□□□□ 0.6
RNF43Q68DV7 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RNF43Q68DV7 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF43Q68DV7 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF43Q68DV7 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF43Q68DV7 AC126763.1-201ENST00000552015 2118 ntBASIC18.8■□□□□ 0.6
RNF43Q68DV7 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF43Q68DV7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF43Q68DV7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
RNF43Q68DV7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
RNF43Q68DV7 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF43Q68DV7 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.8■□□□□ 0.6
RNF43Q68DV7 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF43Q68DV7 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF43Q68DV7 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF43Q68DV7 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RNF43Q68DV7 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF43Q68DV7 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF43Q68DV7 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF43Q68DV7 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RNF43Q68DV7 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF43Q68DV7 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF43Q68DV7 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF43Q68DV7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms