Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LPCAT4Q643R3 C1QL1P1-201ENST00000568105 661 ntBASIC16.93■□□□□ 0.3
LPCAT4Q643R3 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.93■□□□□ 0.3
LPCAT4Q643R3 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LPCAT4Q643R3 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LPCAT4Q643R3 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LPCAT4Q643R3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.93■□□□□ 0.3
LPCAT4Q643R3 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LPCAT4Q643R3 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
LPCAT4Q643R3 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.93■□□□□ 0.3
LPCAT4Q643R3 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LPCAT4Q643R3 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LPCAT4Q643R3 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LPCAT4Q643R3 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
LPCAT4Q643R3 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.93■□□□□ 0.3
LPCAT4Q643R3 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LPCAT4Q643R3 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
LPCAT4Q643R3 LINC00304-203ENST00000565008 1864 ntBASIC16.93■□□□□ 0.3
LPCAT4Q643R3 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
LPCAT4Q643R3 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LPCAT4Q643R3 SDHAP2-201ENST00000455183 2001 ntBASIC16.92■□□□□ 0.3
LPCAT4Q643R3 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
LPCAT4Q643R3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LPCAT4Q643R3 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LPCAT4Q643R3 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
LPCAT4Q643R3 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LPCAT4Q643R3 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LPCAT4Q643R3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LPCAT4Q643R3 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LPCAT4Q643R3 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LPCAT4Q643R3 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
LPCAT4Q643R3 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
LPCAT4Q643R3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LPCAT4Q643R3 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LPCAT4Q643R3 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
LPCAT4Q643R3 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LPCAT4Q643R3 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.92■□□□□ 0.3
LPCAT4Q643R3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
LPCAT4Q643R3 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.92■□□□□ 0.3
LPCAT4Q643R3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LPCAT4Q643R3 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.92■□□□□ 0.3
LPCAT4Q643R3 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC16.92■□□□□ 0.3
LPCAT4Q643R3 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC16.92■□□□□ 0.3
LPCAT4Q643R3 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.92■□□□□ 0.3
LPCAT4Q643R3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.92■□□□□ 0.3
LPCAT4Q643R3 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.92■□□□□ 0.3
LPCAT4Q643R3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.92■□□□□ 0.3
LPCAT4Q643R3 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
LPCAT4Q643R3 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LPCAT4Q643R3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.92■□□□□ 0.3
LPCAT4Q643R3 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LPCAT4Q643R3 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.92■□□□□ 0.3
LPCAT4Q643R3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LPCAT4Q643R3 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LPCAT4Q643R3 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
LPCAT4Q643R3 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.92■□□□□ 0.3
LPCAT4Q643R3 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LPCAT4Q643R3 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LPCAT4Q643R3 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LPCAT4Q643R3 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LPCAT4Q643R3 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LPCAT4Q643R3 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LPCAT4Q643R3 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
LPCAT4Q643R3 AC100803.2-201ENST00000562459 1963 ntBASIC16.91■□□□□ 0.3
LPCAT4Q643R3 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
LPCAT4Q643R3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LPCAT4Q643R3 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LPCAT4Q643R3 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LPCAT4Q643R3 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LPCAT4Q643R3 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
LPCAT4Q643R3 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.91■□□□□ 0.3
LPCAT4Q643R3 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LPCAT4Q643R3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.91■□□□□ 0.3
LPCAT4Q643R3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LPCAT4Q643R3 KRT8P50-201ENST00000562022 1438 ntBASIC16.91■□□□□ 0.3
LPCAT4Q643R3 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LPCAT4Q643R3 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LPCAT4Q643R3 ME3-201ENST00000323418 1068 ntTSL 5 BASIC16.91■□□□□ 0.3
LPCAT4Q643R3 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC16.91■□□□□ 0.3
LPCAT4Q643R3 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.91■□□□□ 0.3
LPCAT4Q643R3 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
LPCAT4Q643R3 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.91■□□□□ 0.3
LPCAT4Q643R3 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.91■□□□□ 0.3
LPCAT4Q643R3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LPCAT4Q643R3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LPCAT4Q643R3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC16.91■□□□□ 0.3
LPCAT4Q643R3 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
LPCAT4Q643R3 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
LPCAT4Q643R3 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.91■□□□□ 0.3
LPCAT4Q643R3 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.91■□□□□ 0.3
LPCAT4Q643R3 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LPCAT4Q643R3 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LPCAT4Q643R3 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LPCAT4Q643R3 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.91■□□□□ 0.3
LPCAT4Q643R3 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LPCAT4Q643R3 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.91■□□□□ 0.3
LPCAT4Q643R3 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LPCAT4Q643R3 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LPCAT4Q643R3 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.9■□□□□ 0.3
LPCAT4Q643R3 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms