Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 KRT18P65-201ENST00000439811 1286 ntBASIC17.08■□□□□ 0.32
PRAMEF17Q5VTA0 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.08■□□□□ 0.32
PRAMEF17Q5VTA0 AC132008.2-207ENST00000454517 770 ntBASIC17.08■□□□□ 0.32
PRAMEF17Q5VTA0 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.08■□□□□ 0.32
PRAMEF17Q5VTA0 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.08■□□□□ 0.32
PRAMEF17Q5VTA0 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
PRAMEF17Q5VTA0 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
PRAMEF17Q5VTA0 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF17Q5VTA0 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.08■□□□□ 0.32
PRAMEF17Q5VTA0 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF17Q5VTA0 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
PRAMEF17Q5VTA0 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF17Q5VTA0 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF17Q5VTA0 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PRAMEF17Q5VTA0 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.08■□□□□ 0.32
PRAMEF17Q5VTA0 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF17Q5VTA0 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF17Q5VTA0 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.08■□□□□ 0.32
PRAMEF17Q5VTA0 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PRAMEF17Q5VTA0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PRAMEF17Q5VTA0 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF17Q5VTA0 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF17Q5VTA0 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF17Q5VTA0 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF17Q5VTA0 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF17Q5VTA0 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF17Q5VTA0 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF17Q5VTA0 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.07■□□□□ 0.32
PRAMEF17Q5VTA0 AP000347.1-202ENST00000435868 847 ntBASIC17.07■□□□□ 0.32
PRAMEF17Q5VTA0 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.07■□□□□ 0.32
PRAMEF17Q5VTA0 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.07■□□□□ 0.32
PRAMEF17Q5VTA0 SAPCD2P3-201ENST00000455031 850 ntBASIC17.07■□□□□ 0.32
PRAMEF17Q5VTA0 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF17Q5VTA0 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.07■□□□□ 0.32
PRAMEF17Q5VTA0 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.07■□□□□ 0.32
PRAMEF17Q5VTA0 TP73-AS1-207ENST00000624167 988 ntBASIC17.07■□□□□ 0.32
PRAMEF17Q5VTA0 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF17Q5VTA0 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF17Q5VTA0 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.07■□□□□ 0.32
PRAMEF17Q5VTA0 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF17Q5VTA0 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF17Q5VTA0 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.07■□□□□ 0.32
PRAMEF17Q5VTA0 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.07■□□□□ 0.32
PRAMEF17Q5VTA0 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
PRAMEF17Q5VTA0 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.07■□□□□ 0.32
PRAMEF17Q5VTA0 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF17Q5VTA0 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.07■□□□□ 0.32
PRAMEF17Q5VTA0 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRAMEF17Q5VTA0 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PRAMEF17Q5VTA0 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF17Q5VTA0 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.06■□□□□ 0.32
PRAMEF17Q5VTA0 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF17Q5VTA0 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF17Q5VTA0 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF17Q5VTA0 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF17Q5VTA0 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF17Q5VTA0 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.06■□□□□ 0.32
PRAMEF17Q5VTA0 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF17Q5VTA0 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PRAMEF17Q5VTA0 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.06■□□□□ 0.32
PRAMEF17Q5VTA0 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.06■□□□□ 0.32
PRAMEF17Q5VTA0 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF17Q5VTA0 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.06■□□□□ 0.32
PRAMEF17Q5VTA0 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
PRAMEF17Q5VTA0 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF17Q5VTA0 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.06■□□□□ 0.32
PRAMEF17Q5VTA0 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
PRAMEF17Q5VTA0 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.06■□□□□ 0.32
PRAMEF17Q5VTA0 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF17Q5VTA0 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.06■□□□□ 0.32
PRAMEF17Q5VTA0 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
PRAMEF17Q5VTA0 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF17Q5VTA0 AC112698.1-201ENST00000510299 916 ntBASIC17.06■□□□□ 0.32
PRAMEF17Q5VTA0 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.06■□□□□ 0.32
PRAMEF17Q5VTA0 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.06■□□□□ 0.32
PRAMEF17Q5VTA0 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF17Q5VTA0 SLC25A6P4-201ENST00000586535 553 ntBASIC17.06■□□□□ 0.32
PRAMEF17Q5VTA0 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.06■□□□□ 0.32
PRAMEF17Q5VTA0 AL138831.2-201ENST00000606564 490 ntBASIC17.06■□□□□ 0.32
PRAMEF17Q5VTA0 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
PRAMEF17Q5VTA0 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.06■□□□□ 0.32
PRAMEF17Q5VTA0 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF17Q5VTA0 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF17Q5VTA0 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PRAMEF17Q5VTA0 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF17Q5VTA0 AC104581.1-202ENST00000635932 2618 ntBASIC17.06■□□□□ 0.32
PRAMEF17Q5VTA0 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF17Q5VTA0 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF17Q5VTA0 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PRAMEF17Q5VTA0 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
PRAMEF17Q5VTA0 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PRAMEF17Q5VTA0 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRAMEF17Q5VTA0 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF17Q5VTA0 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF17Q5VTA0 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
PRAMEF17Q5VTA0 AC125634.1-201ENST00000438758 1403 ntBASIC17.05■□□□□ 0.32
PRAMEF17Q5VTA0 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF17Q5VTA0 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF17Q5VTA0 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEF17Q5VTA0 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms