Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FAM78BQ5VT40 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
FAM78BQ5VT40 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
FAM78BQ5VT40 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
FAM78BQ5VT40 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.28□□□□□ -0.12
FAM78BQ5VT40 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
FAM78BQ5VT40 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
FAM78BQ5VT40 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
FAM78BQ5VT40 AC133681.1-201ENST00000465482 601 ntBASIC14.28□□□□□ -0.12
FAM78BQ5VT40 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC14.28□□□□□ -0.12
FAM78BQ5VT40 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC14.28□□□□□ -0.12
FAM78BQ5VT40 C1QBPP2-201ENST00000528754 825 ntBASIC14.28□□□□□ -0.12
FAM78BQ5VT40 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
FAM78BQ5VT40 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
FAM78BQ5VT40 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
FAM78BQ5VT40 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
FAM78BQ5VT40 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
FAM78BQ5VT40 AL109659.2-201ENST00000606809 1674 ntBASIC14.28□□□□□ -0.12
FAM78BQ5VT40 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC14.28□□□□□ -0.12
FAM78BQ5VT40 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC14.28□□□□□ -0.12
FAM78BQ5VT40 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
FAM78BQ5VT40 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FAM78BQ5VT40 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
FAM78BQ5VT40 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
FAM78BQ5VT40 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.28□□□□□ -0.12
FAM78BQ5VT40 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.28□□□□□ -0.12
FAM78BQ5VT40 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
FAM78BQ5VT40 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FAM78BQ5VT40 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FAM78BQ5VT40 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FAM78BQ5VT40 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FAM78BQ5VT40 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FAM78BQ5VT40 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
FAM78BQ5VT40 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
FAM78BQ5VT40 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
FAM78BQ5VT40 AC006116.8-202ENST00000587620 1550 ntBASIC14.27□□□□□ -0.12
FAM78BQ5VT40 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FAM78BQ5VT40 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FAM78BQ5VT40 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
FAM78BQ5VT40 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
FAM78BQ5VT40 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.27□□□□□ -0.13
FAM78BQ5VT40 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
FAM78BQ5VT40 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC14.27□□□□□ -0.13
FAM78BQ5VT40 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
FAM78BQ5VT40 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC14.27□□□□□ -0.13
FAM78BQ5VT40 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
FAM78BQ5VT40 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC14.27□□□□□ -0.13
FAM78BQ5VT40 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
FAM78BQ5VT40 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
FAM78BQ5VT40 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.27□□□□□ -0.13
FAM78BQ5VT40 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.27□□□□□ -0.13
FAM78BQ5VT40 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
FAM78BQ5VT40 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.27□□□□□ -0.13
FAM78BQ5VT40 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
FAM78BQ5VT40 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
FAM78BQ5VT40 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
FAM78BQ5VT40 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
FAM78BQ5VT40 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
FAM78BQ5VT40 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
FAM78BQ5VT40 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC14.27□□□□□ -0.13
FAM78BQ5VT40 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.27□□□□□ -0.13
FAM78BQ5VT40 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
FAM78BQ5VT40 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
FAM78BQ5VT40 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
FAM78BQ5VT40 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC14.27□□□□□ -0.13
FAM78BQ5VT40 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
FAM78BQ5VT40 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC14.26□□□□□ -0.13
FAM78BQ5VT40 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FAM78BQ5VT40 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
FAM78BQ5VT40 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
FAM78BQ5VT40 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.26□□□□□ -0.13
FAM78BQ5VT40 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FAM78BQ5VT40 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
FAM78BQ5VT40 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
FAM78BQ5VT40 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
FAM78BQ5VT40 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
FAM78BQ5VT40 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FAM78BQ5VT40 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FAM78BQ5VT40 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
FAM78BQ5VT40 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
FAM78BQ5VT40 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
FAM78BQ5VT40 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FAM78BQ5VT40 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
FAM78BQ5VT40 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC14.26□□□□□ -0.13
FAM78BQ5VT40 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
FAM78BQ5VT40 AC004980.1-204ENST00000429707 299 ntBASIC14.26□□□□□ -0.13
FAM78BQ5VT40 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
FAM78BQ5VT40 AC091390.4-202ENST00000476426 537 ntBASIC14.26□□□□□ -0.13
FAM78BQ5VT40 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
FAM78BQ5VT40 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC14.26□□□□□ -0.13
FAM78BQ5VT40 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC14.26□□□□□ -0.13
FAM78BQ5VT40 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC14.26□□□□□ -0.13
FAM78BQ5VT40 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
FAM78BQ5VT40 CABP2-204ENST00000636477 941 ntTSL 5 BASIC14.26□□□□□ -0.13
FAM78BQ5VT40 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
FAM78BQ5VT40 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
FAM78BQ5VT40 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
FAM78BQ5VT40 AL391005.1-201ENST00000623953 2435 ntBASIC14.26□□□□□ -0.13
FAM78BQ5VT40 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FAM78BQ5VT40 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms