Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
LINC01554Q52M75 MIR939-201ENST00000401314 82 ntBASIC9.05□□□□□ -0.96
LINC01554Q52M75 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
LINC01554Q52M75 AC105265.2-201ENST00000467189 838 ntBASIC9.05□□□□□ -0.96
LINC01554Q52M75 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC9.05□□□□□ -0.96
LINC01554Q52M75 STOX2-205ENST00000513034 807 ntTSL 3 BASIC9.05□□□□□ -0.96
LINC01554Q52M75 SLC7A5P2-201ENST00000553010 536 ntBASIC9.05□□□□□ -0.96
LINC01554Q52M75 AC104187.1-201ENST00000607510 612 ntBASIC9.05□□□□□ -0.96
LINC01554Q52M75 FAM21FP-204ENST00000608637 956 ntBASIC9.05□□□□□ -0.96
LINC01554Q52M75 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC9.05□□□□□ -0.96
LINC01554Q52M75 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC9.05□□□□□ -0.96
LINC01554Q52M75 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC9.05□□□□□ -0.96
LINC01554Q52M75 AL358852.1-201ENST00000623174 1268 ntBASIC9.05□□□□□ -0.96
LINC01554Q52M75 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC9.05□□□□□ -0.96
LINC01554Q52M75 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
LINC01554Q52M75 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC9.05□□□□□ -0.96
LINC01554Q52M75 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
LINC01554Q52M75 ADAMTS7P1-201ENST00000613213 4793 ntBASIC9.05□□□□□ -0.96
LINC01554Q52M75 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
LINC01554Q52M75 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
LINC01554Q52M75 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
LINC01554Q52M75 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
LINC01554Q52M75 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
LINC01554Q52M75 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC9.05□□□□□ -0.96
LINC01554Q52M75 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC9.05□□□□□ -0.96
LINC01554Q52M75 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC9.05□□□□□ -0.96
LINC01554Q52M75 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
LINC01554Q52M75 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC9.05□□□□□ -0.96
LINC01554Q52M75 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
LINC01554Q52M75 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
LINC01554Q52M75 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
LINC01554Q52M75 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
LINC01554Q52M75 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
LINC01554Q52M75 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
LINC01554Q52M75 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
LINC01554Q52M75 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC9.05□□□□□ -0.96
LINC01554Q52M75 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
LINC01554Q52M75 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
LINC01554Q52M75 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC9.05□□□□□ -0.96
LINC01554Q52M75 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC9.05□□□□□ -0.96
LINC01554Q52M75 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
LINC01554Q52M75 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC9.05□□□□□ -0.96
LINC01554Q52M75 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
LINC01554Q52M75 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01554Q52M75 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01554Q52M75 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01554Q52M75 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01554Q52M75 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01554Q52M75 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01554Q52M75 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01554Q52M75 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC9.04□□□□□ -0.96
LINC01554Q52M75 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC9.04□□□□□ -0.96
LINC01554Q52M75 PAUPAR-201ENST00000630360 2965 ntBASIC9.04□□□□□ -0.96
LINC01554Q52M75 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01554Q52M75 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC9.04□□□□□ -0.96
LINC01554Q52M75 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01554Q52M75 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01554Q52M75 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
LINC01554Q52M75 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01554Q52M75 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01554Q52M75 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC9.04□□□□□ -0.96
LINC01554Q52M75 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01554Q52M75 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01554Q52M75 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC9.04□□□□□ -0.96
LINC01554Q52M75 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01554Q52M75 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01554Q52M75 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
LINC01554Q52M75 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01554Q52M75 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01554Q52M75 AC007322.3-201ENST00000426526 701 ntBASIC9.04□□□□□ -0.96
LINC01554Q52M75 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC9.04□□□□□ -0.96
LINC01554Q52M75 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC9.04□□□□□ -0.96
LINC01554Q52M75 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01554Q52M75 DUX4L2-201ENST00000561772 1275 ntBASIC9.04□□□□□ -0.96
LINC01554Q52M75 AC138907.5-202ENST00000569484 235 ntBASIC9.04□□□□□ -0.96
LINC01554Q52M75 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC9.04□□□□□ -0.96
LINC01554Q52M75 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC9.04□□□□□ -0.96
LINC01554Q52M75 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC9.04□□□□□ -0.96
LINC01554Q52M75 DUX4L6-201ENST00000626483 1275 ntBASIC9.04□□□□□ -0.96
LINC01554Q52M75 DUX4L1-201ENST00000627662 1275 ntBASIC9.04□□□□□ -0.96
LINC01554Q52M75 DUX4L8-201ENST00000629013 1275 ntBASIC9.04□□□□□ -0.96
LINC01554Q52M75 DUX4L3-201ENST00000630187 1275 ntBASIC9.04□□□□□ -0.96
LINC01554Q52M75 DUX4L7-201ENST00000630678 1275 ntBASIC9.04□□□□□ -0.96
LINC01554Q52M75 DUX4L5-201ENST00000630834 1275 ntBASIC9.04□□□□□ -0.96
LINC01554Q52M75 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC9.04□□□□□ -0.96
LINC01554Q52M75 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01554Q52M75 AL139385.1-201ENST00000611744 3272 ntBASIC9.04□□□□□ -0.96
LINC01554Q52M75 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01554Q52M75 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01554Q52M75 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01554Q52M75 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01554Q52M75 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01554Q52M75 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
LINC01554Q52M75 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01554Q52M75 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
LINC01554Q52M75 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC9.04□□□□□ -0.96
LINC01554Q52M75 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01554Q52M75 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01554Q52M75 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
LINC01554Q52M75 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms